myRT

myRT report for GCA_013297675.1_ASM1329767v1

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Seq: JAAFHZ010000169.1 Synechococcales cyanobacterium bin59.metabat.ball.084 WN_Cyanobacteriales_1_scaffold_169, whole genome shotgun sequence (7598 bp)
Overview 1 RT 1: 194-3050 bp Neighborhood of RT #1 [194, 3061] RVT-CRISPR-like TIGR03985 Feature: gene Location: 194-1024 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 401-1010 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 401 -1 01 0 bp Feature: gene Location: 1091-1630 bp Feature: gene Location: 1679-3061 bp Feature: domain Description: TIGR03985 Location: 2312-3050 bp Feature: domain Description: TIGR03985 Location: 231 2-3050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03985 (CRISPR-associated protein, TIGR03985 family), RVT-CRISPR

Seq: JAAFHZ010000019.1 Synechococcales cyanobacterium bin59.metabat.ball.084 WN_Cyanobacteriales_1_scaffold_19, whole genome shotgun sequence (46877 bp)
Overview 1 RT 1: 5886-10181 bp Neighborhood of RT #1 [5886, 10181] HGbI_like RVT_N RVT-GII McrA Uma2 Feature: gene Location: 5886-6365 bp Feature: domain Description: HGbI_like Location: 5946-6327 bp Feature: domain Description: HGbI_like Location: 5946-632 7 bp Feature: gene Location: 6512-6733 bp Feature: gene Location: 7166-8671 bp Feature: RT Description: RVT_N Location: 7202-7448 bp Feature: RT Description: RVT_N Location: 72 02 -7448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7499-8093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7499-8093 bp Feature: domain Description: McrA Location: 8327-8648 bp Feature: domain Description: McrA Location: 832 7-8648 bp Feature: gene Location: 8912-9544 bp Feature: domain Description: Uma2 Location: 8957-9407 bp Feature: domain Description: Uma2 Location: 8957-9407 bp Feature: gene Location: 9651-10181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HGbI_like, RVT_N (pfam13655), RVT-GII, McrA (COG4058), Uma2 (pfam05685)

Seq: JAAFHZ010000063.1 Synechococcales cyanobacterium bin59.metabat.ball.084 WN_Cyanobacteriales_1_scaffold_63, whole genome shotgun sequence (23850 bp)
Overview 1 RT 1: 19273-23834 bp Neighborhood of RT #1 [19273, 23848] YfmG YcjD RVT-DGRs Avd_like YfmG Feature: gene Location: 19273-20082 bp Feature: domain Description: YfmG Location: 19306-20065 bp Feature: domain Description: YfmG Location: 193 06-20065 bp Feature: gene Location: 20466-20852 bp Feature: domain Description: YcjD Location: 20511-20832 bp Feature: domain Description: YcjD Location: 20511-2083 2 bp Feature: gene Location: 21178-22245 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21388-22027 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 213 88-22027 bp Feature: gene Location: 22202-22579 bp Feature: domain Description: Avd_like Location: 22220-22526 bp Feature: domain Description: Avd_like Location: 22220-22526 bp Feature: gene Location: 22658-23848 bp Feature: domain Description: YfmG Location: 23000-23834 bp Feature: domain Description: YfmG Location: 23 000-23 83 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), YcjD (COG2852), RVT-DGRs, Avd_like (cd16376)