myRT

myRT report for GCA_013297825.1_ASM1329782v1

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Seq: JAAFIN010000172.1 Cytophagales bacterium isolate bin16.concoct.ball.085 WN_Cytophagales_8_scaffold_171, whole genome shotgun sequence (11503 bp)
Overview 1 RT 1: 2-5759 bp Neighborhood of RT #1 [2, 5759] TPR_12 BaeS RVT-Retrons COG3177 Feature: gene Location: 2-1639 bp Feature: domain Description: TPR_12 Location: 218-380 bp Feature: domain Description: TPR_1 2 Location: 21 8-380 bp Feature: domain Description: BaeS Location: 1136-1571 bp Feature: domain Description: BaeS Location: 1 1 36-1 571 bp Feature: gene Location: 1650-2129 bp Feature: gene Location: 2307-3695 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2850-3465 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2850-3465 bp Feature: gene Location: 3951-5090 bp Feature: domain Description: COG3177 Location: 4050-5052 bp Feature: domain Description: COG31 77 Location: 4050-5052 bp Feature: gene Location: 5229-5759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_12 (pfam13424), BaeS (COG0642), RVT-Retrons, COG3177 (Fic family protein )

Seq: JAAFIN010000035.1 Cytophagales bacterium isolate bin16.concoct.ball.085 WN_Cytophagales_8_scaffold_35, whole genome shotgun sequence (29141 bp)
Overview 1 RT 1: 20441-26462 bp Neighborhood of RT #1 [20441, 26462] HTH_7 COG4889 RVT-UG2 Feature: gene Location: 20441-20647 bp Feature: domain Description: HTH_7 Location: 20525-20630 bp Feature: domain Description: HTH_7 Location: 2 052 5-2 0630 bp Feature: gene Location: 20738-24037 bp Feature: domain Description: COG4889 Location: 21248-24032 bp Feature: domain Description: COG4889 Location: 2 12 48-2 4032 bp Feature: gene Location: 24137-25615 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 24374-25268 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 4374-2 52 68 bp Feature: gene Location: 25758-25934 bp Feature: gene Location: 26055-26462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_7 (pfam02796), COG4889 (Predicted helicase ), RVT-UG2

Seq: JAAFIN010000052.1 Cytophagales bacterium isolate bin16.concoct.ball.085 WN_Cytophagales_8_scaffold_51, whole genome shotgun sequence (24375 bp)
Overview 1 RT 1: 5261-12265 bp Neighborhood of RT #1 [5261, 12279] VicK GAF_2 VicK RVT-UNC Sig70_famx1 Feature: gene Location: 5261-7171 bp Feature: domain Description: VicK Location: 6071-6359 bp Feature: domain Description: VicK Location: 6071-63 59 bp Feature: domain Description: GAF_2 Location: 6473-6854 bp Feature: domain Description: GAF_2 Location: 6473 -6854 bp Feature: domain Description: VicK Location: 6920-7154 bp Feature: domain Description: VicK Location: 6920-7154 bp Feature: gene Location: 7287-7415 bp Feature: gene Location: 7711-10137 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8920-9310 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8920-93 10 bp Feature: gene Location: 10271-11626 bp Feature: gene Location: 11695-12279 bp Feature: domain Description: Sig70_famx1 Location: 11731-12265 bp Feature: domain Description: Sig70_famx1 Location: 1173 1-12265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VicK (COG5002), GAF_2 (pfam13185), RVT-UG10/RVT-UG19/RVT-CRISPR/RVT-GII(RVT-UNC), Sig70_famx1 (TIGR02943)