myRT

myRT report for GCA_013297875.1_ASM1329787v1

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Seq: JAAFIW010000004.1 Comamonadaceae bacterium isolate bin27.maxbin.ball.053 WN_Comamonadaceae_3_scaffold_19, whole genome shotgun sequence (303520 bp)
Overview 1 RT 1: 187375-194217 bp Neighborhood of RT #1 [187375, 194267] RVT-CRISPR RVT-CRISPR Cas1_I-II-III PlsC PRK08942 Feature: gene Location: 187375-187815 bp Feature: gene Location: 187842-188165 bp Feature: gene Location: 189184-190716 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 190489-190714 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 90489-1 9071 4 bp Feature: gene Location: 190775-192604 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 190784-191096 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 90784-1 91 096 bp Feature: domain Description: Cas1_I-II-III Location: 191606-192563 bp Feature: domain Description: Cas1 _I-II-III Location: 1 91 606-1 92563 bp Feature: gene Location: 192831-193607 bp Feature: domain Description: PlsC Location: 192870-193566 bp Feature: domain Description: PlsC Location: 1 92870-1 93566 bp Feature: gene Location: 193662-194267 bp Feature: domain Description: PRK08942 Location: 193665-194217 bp Feature: domain Description: PRK08942 Location: 1 93665-1 9421 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), PlsC (smart00563), PRK08942 (D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase)

Seq: JAAFIW010000003.1 Comamonadaceae bacterium isolate bin27.maxbin.ball.053 WN_Comamonadaceae_3_scaffold_4, whole genome shotgun sequence (313184 bp)
Overview 1 RT 1: 74241-79849 bp Neighborhood of RT #1 [74241, 79878] DZR zf-ribbon_3 RVT-Retrons exosortase_XrtQ Feature: gene Location: 74241-75569 bp Feature: domain Description: DZR Location: 74388-74463 bp Feature: domain Description: DZR Location: 74388-74463 bp Feature: gene Location: 75529-76893 bp Feature: domain Description: zf-ribbon_3 Location: 76801-76870 bp Feature: domain Description: zf-ribbon_3 Location: 76801-76870 bp Feature: gene Location: 77117-78484 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77582-78218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77582 -782 18 bp Feature: gene Location: 78561-78971 bp Feature: gene Location: 79021-79878 bp Feature: domain Description: exosortase_XrtQ Location: 79081-79849 bp Feature: domain Description: exosortase_XrtQ Location: 79081-79849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DZR (pfam12773), zf-ribbon_3 (pfam13248), RVT-Retrons, exosortase_XrtQ (NF012182)

Seq: JAAFIW010000010.1 Comamonadaceae bacterium isolate bin27.maxbin.ball.053 WN_Comamonadaceae_3_scaffold_40, whole genome shotgun sequence (148500 bp)
Overview 1 RT 1: 91361-94573 bp Neighborhood of RT #1 [91361, 94573] group_II_RT_mat RVT-GII DUF4188 Feature: gene Location: 91361-92014 bp Feature: gene Location: 91857-92108 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 91947-92082 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 91947-92082 bp Feature: gene Location: 92159-93340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92165-92732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92165-9273 2 bp Feature: gene Location: 93359-93946 bp Feature: domain Description: DUF4188 Location: 93512-93863 bp Feature: domain Description: DUF4188 Location: 93 512-93 863 bp Feature: gene Location: 94001-94573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, DUF4188 (pfam13826)