myRT

myRT report for GCA_013298075.1_ASM1329807v1

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Seq: JAAFJG010000010.1 Cytophagales bacterium isolate bin11.concoct.b28b32b33.026 WN_Cytophagales_7_scaffold_10, whole genome shotgun sequence (103549 bp)
Overview 1 RT 1: 53176-57130 bp Neighborhood of RT #1 [53176, 57141] WD40 rplS RVT-Retrons PIN_VapC4-5_FitB-like Feature: gene Location: 53176-54123 bp Feature: domain Description: WD40 Location: 53215-54109 bp Feature: domain Description: WD40 Location: 5321 5-541 09 bp Feature: gene Location: 54303-54671 bp Feature: domain Description: rplS Location: 54333-54657 bp Feature: domain Description: rplS Location: 54333-54657 bp Feature: gene Location: 54946-56364 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55522-56137 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55522-561 37 bp Feature: gene Location: 56508-56744 bp Feature: gene Location: 56755-57141 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 56776-57130 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 56776-571 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), rplS (PRK05338), RVT-Retrons, PIN_VapC4-5_FitB-like (cd18754)

Seq: JAAFJG010000002.1 Cytophagales bacterium isolate bin11.concoct.b28b32b33.026 WN_Cytophagales_7_scaffold_2, whole genome shotgun sequence (146158 bp)
Overview 1 RT 1: 110959-117057 bp Neighborhood of RT #1 [110959, 117062] RVT-UG2 RVT-UG2 COG2865 PRK09222 Feature: gene Location: 110959-111576 bp Feature: gene Location: 111788-111967 bp Feature: gene Location: 112548-114383 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 112809-113127 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 112 809-11312 7 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 113172-113751 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 113172 -113751 bp Feature: gene Location: 114455-115540 bp Feature: domain Description: COG2865 Location: 114512-115481 bp Feature: domain Description: COG2 865 Location: 114512 -115481 bp Feature: gene Location: 115620-117062 bp Feature: domain Description: PRK09222 Location: 115632-117057 bp Feature: domain Description: PRK092 2 2 Location: 115632 -117057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, COG2865 (Predicted transcriptional regulator, contains HTH domain ), PRK09222 (NADP-dependent isocitrate dehydrogenase)