myRT

myRT report for GCA_013299055.1_ASM1329905v1

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Seq: JAAFKB010000138.1 Sphaerotilus sp. isolate bin1.concoct.b11b12b14.030 WN_Sphaerotilus_1_scaffold_138, whole genome shotgun sequence (7139 bp)
Overview 1 RT 1: 3-3118 bp Neighborhood of RT #1 [3, 3118] YfmG Avd_like RVT-DGRs COG4683 Feature: gene Location: 3-287 bp Feature: domain Description: YfmG Location: 63-177 bp Feature: domain Description: YfmG Location: 63-1 77 bp Feature: gene Location: 327-788 bp Feature: domain Description: Avd_like Location: 411-720 bp Feature: domain Description: Avd_like Location: 41 1 -720 bp Feature: gene Location: 772-1851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 949-1600 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 949-1 600 bp Feature: gene Location: 2158-2523 bp Feature: domain Description: COG4683 Location: 2164-2506 bp Feature: domain Description: COG4683 Location: 21 64-2506 bp Feature: gene Location: 2636-3118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4683 (Uncharacterized protein ), Avd_like (cd16376), YfmG (COG1262), RVT-DGRs

Seq: JAAFKB010000162.1 Sphaerotilus sp. isolate bin1.concoct.b11b12b14.030 WN_Sphaerotilus_1_scaffold_162, whole genome shotgun sequence (5318 bp)
Overview 1 RT 1: 75-4054 bp Neighborhood of RT #1 [75, 4054] RVT-GII DDE_Tnp_IS66 Feature: gene Location: 75-1553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486-1176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486-1176 bp Feature: gene Location: 2050-3435 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2509-3304 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 509-3304 bp Feature: gene Location: 3836-4054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: JAAFKB010000188.1 Sphaerotilus sp. isolate bin1.concoct.b11b12b14.030 WN_Sphaerotilus_1_scaffold_188, whole genome shotgun sequence (3865 bp)
Overview 1 RT 1: 1-3459 bp Neighborhood of RT #1 [1, 3459] RVT-GII GIIM Feature: gene Location: 1-321 bp Feature: gene Location: 390-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 7-1458 bp Feature: domain Description: GIIM Note: maturase Location: 1503-1704 bp Feature: domain Description: GIIM Note: maturase Location: 1503 -1704 bp Feature: gene Location: 2530-2997 bp Feature: gene Location: 3028-3459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)