myRT

myRT report for GCA_013299185.1_ASM1329918v1

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Seq: JAAFKG010000002.1 Microcoleus sp. bin48.metabat.b7b8b9.023 WN_Microcoleus_1_scaffold_2, whole genome shotgun sequence (279716 bp)
Overview 1 RT 1: 262140-266689 bp Neighborhood of RT #1 [262140, 266689] HicB TPR_2 TPR_2 RVT-Retrons Feature: gene Location: 262140-262286 bp Feature: gene Location: 262441-262794 bp Feature: domain Description: HicB Location: 262486-262666 bp Feature: domain Description: HicB Location: 262486-262666 bp Feature: gene Location: 262803-264641 bp Feature: domain Description: TPR_2 Location: 262830-262893 bp Feature: domain Description: TPR_2 Location: 262830-262893 bp Feature: domain Description: TPR_2 Location: 262920-263007 bp Feature: domain Description: TPR_2 Location: 262920-263007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 263466-264087 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 263466-264087 bp Feature: gene Location: 265134-266192 bp Feature: gene Location: 266387-266689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicB (pfam05534), TPR_2 (pfam07719), RVT-Retrons

Seq: JAAFKG010000027.1 Microcoleus sp. bin48.metabat.b7b8b9.023 WN_Microcoleus_1_scaffold_27, whole genome shotgun sequence (93190 bp)
Overview 1 RT 1: 31805-43340 bp Neighborhood of RT #1 [31805, 43402] TMAO_torS PAS PAS PAS PAS sensory_box PAS PRK09776 COG4251 BaeS RVT_N RVT-GII McrA PleD PleD CheY Feature: gene Location: 31805-32239 bp Feature: gene Location: 32985-37994 bp Feature: domain Description: TMAO_torS Location: 33024-33213 bp Feature: domain Description: TMAO_torS Location: 3302 4-332 13 bp Feature: domain Description: PAS Location: 33321-33786 bp Feature: domain Description: PAS Location: 3332 1-33786 bp Feature: domain Description: PAS Location: 33801-34158 bp Feature: domain Description: PAS Location: 33801-34158 bp Feature: domain Description: PAS Location: 34356-34971 bp Feature: domain Description: PAS Location: 34356-34971 bp Feature: domain Description: PAS Location: 34998-35331 bp Feature: domain Description: PAS Location: 34998-35331 bp Feature: domain Description: sensory_box Location: 35424-35727 bp Feature: domain Description: sensory_box Location: 3542 4-3572 7 bp Feature: domain Description: PAS Location: 35736-36123 bp Feature: domain Description: PAS Location: 35736-3612 3 bp Feature: domain Description: PRK09776 Location: 36129-36531 bp Feature: domain Description: PRK09776 Location: 3612 9-36531 bp Feature: domain Description: COG4251 Location: 36540-36717 bp Feature: domain Description: COG42 51 Location: 36540-36717 bp Feature: domain Description: BaeS Location: 36990-37977 bp Feature: domain Description: BaeS Location: 36990-37977 bp Feature: gene Location: 38745-40499 bp Feature: RT Description: RVT_N Location: 38958-39204 bp Feature: RT Description: RVT_N Location: 38958-392 04 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39255-39849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 55-39849 bp Feature: domain Description: McrA Location: 40080-40431 bp Feature: domain Description: McrA Location: 40080-40431 bp Feature: gene Location: 40707-42440 bp Feature: domain Description: PleD Location: 40785-41199 bp Feature: domain Description: PleD Location: 40785-41199 bp Feature: domain Description: PleD Location: 41817-42399 bp Feature: domain Description: PleD Location: 41817-42 399 bp Feature: gene Location: 42935-43402 bp Feature: domain Description: CheY Location: 42959-43340 bp Feature: domain Description: CheY Location: 42 959-43340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TMAO_torS (TIGR02956), PAS (smart00091), sensory_box (TIGR00229), PRK09776 (putative diguanylate cyclase; Provisional), COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), BaeS (COG0642), RVT_N (pfam13655), RVT-GII, McrA (COG4058), PleD (COG3706)
CheY (COG0784)

Seq: JAAFKG010000049.1 Microcoleus sp. bin48.metabat.b7b8b9.023 WN_Microcoleus_1_scaffold_49, whole genome shotgun sequence (62711 bp)
Overview 1 RT 1: 23929-27871 bp Neighborhood of RT #1 [23929, 28161] InsQ RVT_N RVT-GII RVT-GII YkfC McrA PRK11360 Feature: gene Location: 23929-24954 bp Feature: domain Description: InsQ Location: 23932-24913 bp Feature: domain Description: InsQ Location: 23 93 2-24913 bp Feature: gene Location: 25426-25578 bp Feature: gene Location: 25616-26011 bp Feature: RT Description: RVT_N Location: 25646-25892 bp Feature: RT Description: RVT_N Location: 25646-25892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25934-25997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2593 4-25997 bp Feature: gene Location: 26109-27434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26121-26634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26121-2663 4 bp Feature: domain Description: YkfC Location: 26796-26994 bp Feature: domain Description: YkfC Location: 26796-26994 bp Feature: domain Description: McrA Location: 27069-27369 bp Feature: domain Description: McrA Location: 27069-273 69 bp Feature: gene Location: 27464-27634 bp Feature: gene Location: 27751-28161 bp Feature: domain Description: PRK11360 Location: 27754-27871 bp Feature: domain Description: PRK113 60 Location: 27754-27871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), McrA (COG4058), PRK11360 (two-component system sensor histidine kinase AtoS)