myRT

myRT report for GCA_013299555.1_ASM1329955v1

Download annotations/find similar RTs

Seq: JAAILS010000103.1 Blautia wexlerae strain MSK.18.16 NODE_104_length_1883_cov_319.257, whole genome shotgun sequence (1883 bp)
Overview 1 RT 1: 143-1715 bp Neighborhood of RT #1 [143, 1813] RVT-GII GIIM Feature: gene Location: 143-286 bp Feature: gene Location: 338-526 bp Feature: gene Location: 557-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761 -1 41 8 bp Feature: domain Description: GIIM Note: maturase Location: 1502-1715 bp Feature: domain Description: GIIM Note: maturase Location: 1 502-1 71 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAILS010000112.1 Blautia wexlerae strain MSK.18.16 NODE_114_length_1465_cov_167.434, whole genome shotgun sequence (1465 bp)
Overview 1 RT 1: 2-1344 bp Neighborhood of RT #1 [2, 1415] fkp Fucokinase RVT-GII GIIM Feature: gene Location: 2-202 bp Feature: domain Description: fkp Location: 5-191 bp Feature: domain Description: fkp Location: 5-191 bp Feature: gene Location: 258-770 bp Feature: domain Description: Fucokinase Location: 288-483 bp Feature: domain Description: Fucokinase Location: 2 88-483 bp Feature: gene Location: 873-1415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1059 bp Feature: domain Description: GIIM Note: maturase Location: 1119-1344 bp Feature: domain Description: GIIM Note: maturase Location: 1119-1344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fkp (PRK13412), Fucokinase (pfam07959), RVT-GII, GIIM (pfam08388)

Seq: JAAILS010000064.1 Blautia wexlerae strain MSK.18.16 NODE_64_length_11331_cov_44.2336, whole genome shotgun sequence (11331 bp)
Overview 1 RT 1: 20-3657 bp Neighborhood of RT #1 [20, 3657] RVT-GII Feature: gene Location: 20-805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-776 bp Feature: gene Location: 1100-1291 bp Feature: gene Location: 1465-3657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAILS010000071.1 Blautia wexlerae strain MSK.18.16 NODE_71_length_8687_cov_181.068, whole genome shotgun sequence (8687 bp)
Overview 1 RT 1: 5596-8639 bp Neighborhood of RT #1 [5596, 8668] PGM2 RVT-GII Feature: gene Location: 5596-7269 bp Feature: domain Description: PGM2 Location: 5713-7246 bp Feature: domain Description: PGM2 Location: 5713-724 6 bp Feature: gene Location: 7545-7874 bp Feature: gene Location: 7883-8668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8138-8639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8138-8639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PGM2 (cd05799), RVT-GII

Seq: JAAILS010000088.1 Blautia wexlerae strain MSK.18.16 NODE_89_length_4468_cov_145.677, whole genome shotgun sequence (4468 bp)
Overview 1 RT 1: 205-3712 bp Neighborhood of RT #1 [205, 3729] RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 205-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1024 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: gene Location: 1581-3257 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1722-1911 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1722-1911 bp Feature: domain Description: zf-IS66 Location: 1980-2112 bp Feature: domain Description: zf-IS66 Location: 1980-2112 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2175-3030 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2175 -3030 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3051-3165 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 305 1-3165 bp Feature: gene Location: 3391-3729 bp Feature: domain Description: TnpB_IS66 Location: 3421-3712 bp Feature: domain Description: TnpB_IS66 Location: 3421-3712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)