myRT

myRT report for GCA_013299595.1_ASM1329959v1

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Seq: JAAILN010000018.1 [Ruminococcus] gnavus strain MSK.5.19 NODE_18_length_66052_cov_366.743, whole genome shotgun sequence (66052 bp)
Overview 1 RT 1: 51829-57397 bp Neighborhood of RT #1 [51829, 57423] guaA RVT-UG14 RVT-UG14 HipB Acetyltransf_10 Feature: gene Location: 51829-53052 bp Feature: gene Location: 53178-54725 bp Feature: domain Description: guaA Location: 53184-54723 bp Feature: domain Description: guaA Location: 531 84-54723 bp Feature: gene Location: 54807-56360 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 55155-55227 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 551 55-55227 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 55242-55515 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 55242-5551 5 bp Feature: gene Location: 56350-56928 bp Feature: domain Description: HipB Location: 56359-56581 bp Feature: domain Description: HipB Location: 56359-56581 bp Feature: gene Location: 56950-57423 bp Feature: domain Description: Acetyltransf_10 Location: 57031-57397 bp Feature: domain Description: Acetyltransf_1 0 Location: 57031 -57397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), RVT-UG14, HipB (COG1396), Acetyltransf_10 (pfam13673)

Seq: JAAILN010000035.1 [Ruminococcus] gnavus strain MSK.5.19 NODE_35_length_23032_cov_336.858, whole genome shotgun sequence (23032 bp)
Overview 1 RT 1: 26-5345 bp Neighborhood of RT #1 [26, 5389] TraG-D_C RVT-GII RVT-GII VirD4 DUF3801 Feature: gene Location: 26-283 bp Feature: domain Description: TraG-D_C Location: 119-254 bp Feature: domain Description: TraG-D_C Location: 119-2 54 bp Feature: gene Location: 293-1441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-596 bp Feature: gene Location: 1477-2202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1786-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1786-2 173 bp Feature: gene Location: 2960-4264 bp Feature: domain Description: VirD4 Location: 3176-4205 bp Feature: domain Description: VirD4 Location: 3176-42 05 bp Feature: gene Location: 4271-5389 bp Feature: domain Description: DUF3801 Location: 4373-5345 bp Feature: domain Description: DUF3801 Location: 4373-5345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)

Seq: JAAILN010000079.1 [Ruminococcus] gnavus strain MSK.5.19 NODE_81_length_2519_cov_1020.11, whole genome shotgun sequence (2519 bp)
Overview 1 RT 1: 111-2518 bp Neighborhood of RT #1 [111, 2518] RVT-GII Intron_maturas2 Feature: gene Location: 111-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 93 -1221 bp Feature: domain Description: Intron_maturas2 Location: 1305-1647 bp Feature: domain Description: Intron_maturas2 Location: 13 05-1647 bp Feature: gene Location: 2183-2518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)