myRT

myRT report for GCA_013299675.1_ASM1329967v1

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Seq: JAAIMD010000107.1 [Eubacterium] rectale strain MSK.17.52 NODE_108_length_1014_cov_1709.82, whole genome shotgun sequence (1014 bp)
Overview 1 RT 1: 50-992 bp Neighborhood of RT #1 [50, 1012] RVT-GII Feature: gene Location: 50-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIMD010000007.1 [Eubacterium] rectale strain MSK.17.52 NODE_7_length_117725_cov_288.402, whole genome shotgun sequence (117725 bp)
Overview 1 RT 1: 61237-73897 bp Neighborhood of RT #1 [61237, 73911] DUF3848 DUF3849 COG4646 KOG1000 RVT-GII YtxK COG4646 TTRAP Feature: gene Location: 61237-62055 bp Feature: domain Description: DUF3848 Location: 61255-61534 bp Feature: domain Description: DUF3848 Location: 612 55-61534 bp Feature: domain Description: DUF3849 Location: 61570-61933 bp Feature: domain Description: DUF3849 Location: 61570-61933 bp Feature: gene Location: 62057-64078 bp Feature: domain Description: COG4646 Location: 62069-62636 bp Feature: domain Description: COG4646 Location: 62 069-62 636 bp Feature: domain Description: KOG1000 Location: 63074-63278 bp Feature: domain Description: KOG1000 Location: 63074-632 78 bp Feature: gene Location: 64238-66145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64562-65276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64562 -652 76 bp Feature: gene Location: 66823-73665 bp Feature: domain Description: YtxK Location: 71014-71569 bp Feature: domain Description: YtxK Location: 71014-71569 bp Feature: domain Description: COG4646 Location: 71638-73645 bp Feature: domain Description: COG4646 Location: 71638-73645 bp Feature: gene Location: 73696-73911 bp Feature: domain Description: TTRAP Location: 73708-73897 bp Feature: domain Description: TTRAP Location: 73708-73897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3848 (pfam12959), DUF3849 (pfam12960), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, YtxK (COG0827), TTRAP (pfam14203)

Seq: JAAIMD010000087.1 [Eubacterium] rectale strain MSK.17.52 NODE_88_length_1862_cov_1268.98, whole genome shotgun sequence (1862 bp)
Overview 1 RT 1: 493-1594 bp Neighborhood of RT #1 [493, 1776] RVT-GII GIIM Feature: gene Location: 493-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703 -13 18 bp Feature: domain Description: GIIM Note: maturase Location: 1378-1594 bp Feature: domain Description: GIIM Note: maturase Location: 13 78-1594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)