myRT

myRT report for GCA_013300205.1_ASM1330020v1

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Seq: JAAIUE010000030.1 Fusicatenibacter saccharivorans strain MSK.22.67 NODE_30_length_18645_cov_105.333, whole genome shotgun sequence (18645 bp)
Overview 1 RT 1: 9046-13183 bp Neighborhood of RT #1 [9046, 13584] PolyPPase_VTC_like RVT-GII PRK10572 PRK10572 LacZ Feature: gene Location: 9046-9741 bp Feature: domain Description: PolyPPase_VTC_like Location: 9064-9706 bp Feature: domain Description: PolyPPase_VTC_like Location: 9064-9706 bp Feature: gene Location: 9962-10249 bp Feature: gene Location: 10266-10757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10560-10749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0560-1 0749 bp Feature: gene Location: 10877-11797 bp Feature: domain Description: PRK10572 Location: 11111-11246 bp Feature: domain Description: PRK1 0572 Location: 1 1 1 1 1 -1 1 246 bp Feature: domain Description: PRK10572 Location: 11447-11771 bp Feature: domain Description: PRK1 0572 Location: 1 1 447-1 1 771 bp Feature: gene Location: 11866-13584 bp Feature: domain Description: LacZ Location: 11917-13183 bp Feature: domain Description: LacZ Location: 1 1 91 7-1 31 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PolyPPase_VTC_like (cd07750), RVT-GII, PRK10572 (arabinose operon transcriptional regulator AraC), LacZ (COG3250)

Seq: JAAIUE010000004.1 Fusicatenibacter saccharivorans strain MSK.22.67 NODE_4_length_204658_cov_305.584, whole genome shotgun sequence (204658 bp)
Overview 1 RT 1: 202166-204341 bp Neighborhood of RT #1 [202166, 204412] BaeS RVT-GII GIIM Feature: gene Location: 202166-202348 bp Feature: gene Location: 202154-203326 bp Feature: domain Description: BaeS Location: 202415-203318 bp Feature: domain Description: BaeS Location: 2 02 415-2 03318 bp Feature: gene Location: 203849-204412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203855-204056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 03855-2 04056 bp Feature: domain Description: GIIM Note: maturase Location: 204116-204341 bp Feature: domain Description: GIIM Note: maturase Location: 2 04116-2 04341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388)