myRT

myRT report for GCA_013300425.1_ASM1330042v1

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Seq: JAAITY010000017.1 Fusicatenibacter saccharivorans strain MSK.19.10 NODE_17_length_72382_cov_161.104, whole genome shotgun sequence (72382 bp)
Overview 1 RT 1: 3517-8795 bp Neighborhood of RT #1 [3517, 8795] ABC_trans_CmpB RVT-DGRs Feature: gene Location: 3517-3951 bp Feature: domain Description: ABC_trans_CmpB Location: 3595-3865 bp Feature: domain Description: ABC_trans_CmpB Location: 3595-3865 bp Feature: gene Location: 3951-4574 bp Feature: gene Location: 4609-5865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4900-5491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4900-5491 bp Feature: gene Location: 6249-7928 bp Feature: gene Location: 7941-8795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_trans_CmpB (pfam06541), RVT-DGRs

Seq: JAAITY010000019.1 Fusicatenibacter saccharivorans strain MSK.19.10 NODE_19_length_71512_cov_267.624, whole genome shotgun sequence (71512 bp)
Overview 1 RT 1: 20140-24630 bp Neighborhood of RT #1 [20140, 24647] zf-ribbon_3 TPR TPR_2 HemY_N TPR RVT-GII GIIM spore_II_AA PRK03660 Feature: gene Location: 20140-20319 bp Feature: gene Location: 20329-21744 bp Feature: domain Description: zf-ribbon_3 Location: 20338-20401 bp Feature: domain Description: zf-ribbon_3 Location: 2 0338-2 0401 bp Feature: domain Description: TPR Location: 20437-20737 bp Feature: domain Description: TPR Location: 2 0437-2 0737 bp Feature: domain Description: TPR_2 Location: 20806-20902 bp Feature: domain Description: TPR_2 Location: 2 0806-2 0902 bp Feature: domain Description: HemY_N Location: 21046-21364 bp Feature: domain Description: HemY_N Location: 2 1046-2 1364 bp Feature: domain Description: TPR Location: 21499-21673 bp Feature: domain Description: TPR Location: 2 1499-2 1673 bp Feature: gene Location: 22412-23695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22622-23237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 62 2 -2 32 37 bp Feature: domain Description: GIIM Note: maturase Location: 23297-23519 bp Feature: domain Description: GIIM Note: maturase Location: 2 32 97-2 3519 bp Feature: gene Location: 23815-24138 bp Feature: domain Description: spore_II_AA Location: 23836-24124 bp Feature: domain Description: spore_II_AA Location: 2 3836-2 412 4 bp Feature: gene Location: 24174-24647 bp Feature: domain Description: PRK03660 Location: 24219-24630 bp Feature: domain Description: PRK03660 Location: 2 42 19-2 4630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ribbon_3 (pfam13248), TPR (smart00028), TPR_2 (pfam07719), HemY_N (pfam07219), RVT-GII, GIIM (pfam08388), spore_II_AA (TIGR02886), PRK03660 (anti-sigma F factor; Provisional)

Seq: JAAITY010000066.1 Fusicatenibacter saccharivorans strain MSK.19.10 NODE_66_length_5878_cov_98.1298, whole genome shotgun sequence (5878 bp)
Overview 1 RT 1: 92-3238 bp Neighborhood of RT #1 [92, 3300] RVT-GII INT_ICEBs1_C_like Feature: gene Location: 92-1387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 47-103 7 bp Feature: gene Location: 1501-1635 bp Feature: gene Location: 2005-3300 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2599-3238 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2599-3 23 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII

Seq: JAAITY010000006.1 Fusicatenibacter saccharivorans strain MSK.19.10 NODE_6_length_137316_cov_259.874, whole genome shotgun sequence (137316 bp)
Overview 1 RT 1: 9129-14654 bp Neighborhood of RT #1 [9129, 14701] PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C AAAA RVT-GII PHA02517 IstB_IS21 Feature: gene Location: 9129-11186 bp Feature: domain Description: PHA02517 Location: 9228-10011 bp Feature: domain Description: PHA02517 Location: 9228-10011 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10080-10914 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10080-10914 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 10938-11061 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 10938-11061 bp Feature: gene Location: 11446-12843 bp Feature: domain Description: AAAA Location: 11455-12673 bp Feature: domain Description: AAAA Location: 114 55-12673 bp Feature: gene Location: 13376-13855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13586-13787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13586-13787 bp Feature: gene Location: 13792-14439 bp Feature: domain Description: PHA02517 Location: 13864-14404 bp Feature: domain Description: PHA02517 Location: 13864 -14 4 04 bp Feature: gene Location: 14462-14701 bp Feature: domain Description: IstB_IS21 Location: 14468-14654 bp Feature: domain Description: IstB_IS21 Location: 14 4 68-14 654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAAA (COG1672), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), IstB_IS21 (pfam01695), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)