myRT

myRT report for GCA_013300445.1_ASM1330044v1

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Seq: JAAILV010000025.1 Roseburia intestinalis strain MSK.17.84 NODE_25_length_76071_cov_245.07, whole genome shotgun sequence (76071 bp)
Overview 1 RT 1: 24197-30357 bp Neighborhood of RT #1 [24197, 30398] RVT-GII Intron_maturas2 Peptidase_A24 pilus_cpaB Feature: gene Location: 24197-24766 bp Feature: gene Location: 24847-26574 bp Feature: gene Location: 27114-28931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27378-28209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27378-28209 bp Feature: domain Description: Intron_maturas2 Location: 28281-28587 bp Feature: domain Description: Intron_maturas2 Location: 28281 -28587 bp Feature: gene Location: 29100-29546 bp Feature: domain Description: Peptidase_A24 Location: 29115-29433 bp Feature: domain Description: Peptidase_A24 Location: 291 1 5-29433 bp Feature: gene Location: 29559-30398 bp Feature: domain Description: pilus_cpaB Location: 29595-30357 bp Feature: domain Description: pilus_cpaB Location: 29595-30357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Peptidase_A24 (pfam01478), pilus_cpaB (TIGR03177)

Seq: JAAILV010000027.1 Roseburia intestinalis strain MSK.17.84 NODE_27_length_68322_cov_244.678, whole genome shotgun sequence (68322 bp)
Overview 1 RT 1: 4955-7931 bp Neighborhood of RT #1 [4955, 8452] DUF16 RVT-DGRs Avd_like pfam03781 Feature: gene Location: 4955-5263 bp Feature: domain Description: DUF16 Location: 4970-5156 bp Feature: domain Description: DUF16 Location: 4970-5156 bp Feature: gene Location: 5304-5522 bp Feature: gene Location: 5524-6666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5791-6448 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5791-6448 bp Feature: gene Location: 6888-7223 bp Feature: domain Description: Avd_like Location: 6906-7212 bp Feature: domain Description: Avd_like Location: 6906-72 12 bp Feature: gene Location: 7367-8452 bp Feature: domain Description: pfam03781 Location: 7577-7931 bp Feature: domain Description: pfam03781 Location: 7577-7931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF16 (pfam01519), RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JAAILV010000028.1 Roseburia intestinalis strain MSK.17.84 NODE_28_length_64748_cov_193.697, whole genome shotgun sequence (64748 bp)
Overview 1 RT 1: 40430-43212 bp Neighborhood of RT #1 [40430, 43212] Avd_like RVT-DGRs Feature: gene Location: 40430-40828 bp Feature: domain Description: Avd_like Location: 40472-40793 bp Feature: domain Description: Avd_like Location: 40472-40793 bp Feature: gene Location: 40856-41035 bp Feature: gene Location: 41187-42332 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41421-42081 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41421-42081 bp Feature: gene Location: 42502-42975 bp Feature: gene Location: 42991-43212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: JAAILV010000036.1 Roseburia intestinalis strain MSK.17.84 NODE_36_length_36701_cov_221.054, whole genome shotgun sequence (36701 bp)
Overview 1 RT 1: 6139-11080 bp Neighborhood of RT #1 [6139, 11505] RVT-DGRs DUF3751 DUF2313 Feature: gene Location: 6139-6453 bp Feature: gene Location: 6510-6686 bp Feature: gene Location: 7057-8307 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7261-8020 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7261-8020 bp Feature: gene Location: 8808-10613 bp Feature: domain Description: DUF3751 Location: 8829-9261 bp Feature: domain Description: DUF3751 Location: 8829-9261 bp Feature: gene Location: 10633-11505 bp Feature: domain Description: DUF2313 Location: 10654-11080 bp Feature: domain Description: DUF2313 Location: 10654 -11080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2313 (pfam10076), RVT-DGRs, DUF3751 (pfam12571)

Seq: JAAILV010000045.1 Roseburia intestinalis strain MSK.17.84 NODE_45_length_22826_cov_211.061, whole genome shotgun sequence (22826 bp)
Overview 1 RT 1: 3163-6633 bp Neighborhood of RT #1 [3163, 6633] RelB_DinJ RVT-DGRs Feature: gene Location: 3163-3390 bp Feature: gene Location: 3621-3932 bp Feature: domain Description: RelB_DinJ Location: 3630-3870 bp Feature: domain Description: RelB_DinJ Location: 3630-3870 bp Feature: gene Location: 4532-5731 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4727-5450 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4727-5 45 0 bp Feature: gene Location: 5724-6095 bp Feature: gene Location: 6037-6633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), RVT-DGRs

Seq: JAAILV010000098.1 Roseburia intestinalis strain MSK.17.84 NODE_99_length_1868_cov_466.323, whole genome shotgun sequence (1868 bp)
Overview 1 RT 1: 499-1600 bp Neighborhood of RT #1 [499, 1782] RVT-GII GIIM Feature: gene Location: 499-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709-1324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709-1324 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1600 bp Feature: domain Description: GIIM Note: maturase Location: 1384-16 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)