myRT

myRT report for GCA_013300455.1_ASM1330045v1

Download annotations/find similar RTs

Seq: JAAILR010000103.1 Blautia wexlerae strain MSK.18.18 NODE_104_length_1883_cov_317.055, whole genome shotgun sequence (1883 bp)
Overview 1 RT 1: 143-1715 bp Neighborhood of RT #1 [143, 1813] RVT-GII GIIM Feature: gene Location: 143-286 bp Feature: gene Location: 338-526 bp Feature: gene Location: 557-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761 -1 41 8 bp Feature: domain Description: GIIM Note: maturase Location: 1502-1715 bp Feature: domain Description: GIIM Note: maturase Location: 1 502-1 71 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAILR010000111.1 Blautia wexlerae strain MSK.18.18 NODE_112_length_1465_cov_165.516, whole genome shotgun sequence (1465 bp)
Overview 1 RT 1: 2-1344 bp Neighborhood of RT #1 [2, 1415] fkp Fucokinase RVT-GII GIIM Feature: gene Location: 2-202 bp Feature: domain Description: fkp Location: 5-191 bp Feature: domain Description: fkp Location: 5-191 bp Feature: gene Location: 258-770 bp Feature: domain Description: Fucokinase Location: 288-483 bp Feature: domain Description: Fucokinase Location: 2 88-483 bp Feature: gene Location: 873-1415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1059 bp Feature: domain Description: GIIM Note: maturase Location: 1119-1344 bp Feature: domain Description: GIIM Note: maturase Location: 1119-1344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fkp (PRK13412), Fucokinase (pfam07959), RVT-GII, GIIM (pfam08388)

Seq: JAAILR010000021.1 Blautia wexlerae strain MSK.18.18 NODE_21_length_66259_cov_147.303, whole genome shotgun sequence (66259 bp)
Overview 1 RT 1: 64969-66211 bp Neighborhood of RT #1 [64969, 66240] RVT-GII Feature: gene Location: 64969-65160 bp Feature: gene Location: 65303-65446 bp Feature: gene Location: 65455-66240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65710-66211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65710-66211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAILR010000072.1 Blautia wexlerae strain MSK.18.18 NODE_72_length_8687_cov_162.754, whole genome shotgun sequence (8687 bp)
Overview 1 RT 1: 5596-8639 bp Neighborhood of RT #1 [5596, 8668] PGM2 RVT-GII Feature: gene Location: 5596-7269 bp Feature: domain Description: PGM2 Location: 5713-7246 bp Feature: domain Description: PGM2 Location: 5713-724 6 bp Feature: gene Location: 7545-7874 bp Feature: gene Location: 7883-8668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8138-8639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8138-8639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PGM2 (cd05799), RVT-GII

Seq: JAAILR010000087.1 Blautia wexlerae strain MSK.18.18 NODE_88_length_4468_cov_144.696, whole genome shotgun sequence (4468 bp)
Overview 1 RT 1: 205-3712 bp Neighborhood of RT #1 [205, 3729] RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 205-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1024 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: gene Location: 1581-3257 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1722-1911 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1722-1911 bp Feature: domain Description: zf-IS66 Location: 1980-2112 bp Feature: domain Description: zf-IS66 Location: 1980-2112 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2175-3030 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2175 -3030 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3051-3165 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 305 1-3165 bp Feature: gene Location: 3391-3729 bp Feature: domain Description: TnpB_IS66 Location: 3421-3712 bp Feature: domain Description: TnpB_IS66 Location: 3421-3712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)