myRT

myRT report for GCA_013300555.1_ASM1330055v1

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Seq: JAAIME010000011.1 [Eubacterium] rectale strain MSK.17.42 NODE_11_length_106097_cov_338.052, whole genome shotgun sequence (106097 bp)
Overview 1 RT 1: 43815-56367 bp Neighborhood of RT #1 [43815, 56489] TTRAP YtxK COG4646 RVT-GII COG4646 KOG1000 DUF3848 DUF3849 Feature: gene Location: 43815-44030 bp Feature: domain Description: TTRAP Location: 43827-44016 bp Feature: domain Description: TTRAP Location: 43827-4401 6 bp Feature: gene Location: 44061-50903 bp Feature: domain Description: YtxK Location: 48252-48807 bp Feature: domain Description: YtxK Location: 48252-48807 bp Feature: domain Description: COG4646 Location: 48876-50883 bp Feature: domain Description: COG4646 Location: 48876-50883 bp Feature: gene Location: 51581-53488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51905-52619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 905-5261 9 bp Feature: gene Location: 53615-55669 bp Feature: domain Description: COG4646 Location: 53657-54227 bp Feature: domain Description: COG4646 Location: 53657-54227 bp Feature: domain Description: KOG1000 Location: 54665-54869 bp Feature: domain Description: KOG1 000 Location: 54665-54869 bp Feature: gene Location: 55671-56489 bp Feature: domain Description: DUF3848 Location: 55689-55968 bp Feature: domain Description: DUF3848 Location: 55689-55968 bp Feature: domain Description: DUF3849 Location: 56004-56367 bp Feature: domain Description: DUF3849 Location: 56004-56367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTRAP (pfam14203), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), DUF3848 (pfam12959), DUF3849 (pfam12960)

Seq: JAAIME010000039.1 [Eubacterium] rectale strain MSK.17.42 NODE_39_length_22818_cov_308.327, whole genome shotgun sequence (22818 bp)
Overview 1 RT 1: 14061-19002 bp Neighborhood of RT #1 [14061, 19427] RVT-DGRs DUF3751 DUF2313 Feature: gene Location: 14061-14375 bp Feature: gene Location: 14432-14608 bp Feature: gene Location: 14979-16229 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15183-15942 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15183-15942 bp Feature: gene Location: 16730-18535 bp Feature: domain Description: DUF3751 Location: 16751-17183 bp Feature: domain Description: DUF3751 Location: 16751-17183 bp Feature: gene Location: 18555-19427 bp Feature: domain Description: DUF2313 Location: 18576-19002 bp Feature: domain Description: DUF2 313 Location: 18576-19002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF3751 (pfam12571), DUF2313 (pfam10076)

Seq: JAAIME010000079.1 [Eubacterium] rectale strain MSK.17.42 NODE_80_length_1869_cov_605.795, whole genome shotgun sequence (1869 bp)
Overview 1 RT 1: 87-1188 bp Neighborhood of RT #1 [87, 1370] RVT-GII GIIM Feature: gene Location: 87-1370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-912 bp Feature: domain Description: GIIM Note: maturase Location: 972-1188 bp Feature: domain Description: GIIM Note: maturase Location: 972-1188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAIME010000097.1 [Eubacterium] rectale strain MSK.17.42 NODE_98_length_1014_cov_2031.9, whole genome shotgun sequence (1014 bp)
Overview 1 RT 1: 3-945 bp Neighborhood of RT #1 [3, 965] RVT-GII Feature: gene Location: 3-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-94 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII