myRT

myRT report for GCA_013300675.1_ASM1330067v1

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Seq: JAAIMJ010000016.1 [Eubacterium] rectale strain MSK.17.19 NODE_16_length_66152_cov_243.162, whole genome shotgun sequence (66152 bp)
Overview 1 RT 1: 61247-65408 bp Neighborhood of RT #1 [61247, 65695] DUF2313 DUF3751 RVT-DGRs Feature: gene Location: 61247-62119 bp Feature: domain Description: DUF2313 Location: 61268-61694 bp Feature: domain Description: DUF231 3 Location: 61 268-61 694 bp Feature: gene Location: 62139-63944 bp Feature: domain Description: DUF3751 Location: 62160-62592 bp Feature: domain Description: DUF3751 Location: 621 60-62592 bp Feature: gene Location: 64445-65695 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64649-65408 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64649-65408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2313 (pfam10076), DUF3751 (pfam12571), RVT-DGRs

Seq: JAAIMJ010000005.1 [Eubacterium] rectale strain MSK.17.19 NODE_5_length_133702_cov_315.175, whole genome shotgun sequence (133702 bp)
Overview 1 RT 1: 77214-89874 bp Neighborhood of RT #1 [77214, 89888] DUF3848 DUF3849 COG4646 KOG1000 RVT-GII YtxK COG4646 TTRAP Feature: gene Location: 77214-78032 bp Feature: domain Description: DUF3848 Location: 77232-77511 bp Feature: domain Description: DUF3848 Location: 772 32 -77511 bp Feature: domain Description: DUF3849 Location: 77547-77910 bp Feature: domain Description: DUF3849 Location: 77547-77910 bp Feature: gene Location: 78034-80055 bp Feature: domain Description: COG4646 Location: 78046-78613 bp Feature: domain Description: COG4646 Location: 78046-78613 bp Feature: domain Description: KOG1000 Location: 79051-79255 bp Feature: domain Description: KOG1000 Location: 79051-792 55 bp Feature: gene Location: 80215-82122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80539-81253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80539-812 53 bp Feature: gene Location: 82800-89642 bp Feature: domain Description: YtxK Location: 86991-87546 bp Feature: domain Description: YtxK Location: 86991-87546 bp Feature: domain Description: COG4646 Location: 87615-89622 bp Feature: domain Description: COG4646 Location: 87615-8962 2 bp Feature: gene Location: 89673-89888 bp Feature: domain Description: TTRAP Location: 89685-89874 bp Feature: domain Description: TTRAP Location: 89685-89874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3848 (pfam12959), DUF3849 (pfam12960), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, YtxK (COG0827), TTRAP (pfam14203)

Seq: JAAIMJ010000075.1 [Eubacterium] rectale strain MSK.17.19 NODE_76_length_1869_cov_615.492, whole genome shotgun sequence (1869 bp)
Overview 1 RT 1: 87-1188 bp Neighborhood of RT #1 [87, 1370] RVT-GII GIIM Feature: gene Location: 87-1370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-912 bp Feature: domain Description: GIIM Note: maturase Location: 972-1188 bp Feature: domain Description: GIIM Note: maturase Location: 972-1188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAIMJ010000094.1 [Eubacterium] rectale strain MSK.17.19 NODE_95_length_1027_cov_2049.47, whole genome shotgun sequence (1027 bp)
Overview 1 RT 1: 3-945 bp Neighborhood of RT #1 [3, 965] RVT-GII Feature: gene Location: 3-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-94 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII