myRT

myRT report for GCA_013300755.1_ASM1330075v1

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Seq: JAAITZ010000003.1 Fusicatenibacter saccharivorans strain MSK.22.18 NODE_3_length_228084_cov_221.573, whole genome shotgun sequence (228084 bp)
Overview 1 RT 1: 225592-227767 bp Neighborhood of RT #1 [225592, 227838] BaeS RVT-GII GIIM Feature: gene Location: 225592-225774 bp Feature: gene Location: 225580-226752 bp Feature: domain Description: BaeS Location: 225841-226744 bp Feature: domain Description: BaeS Location: 225841 -226744 bp Feature: gene Location: 227275-227838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227281-227482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227281 -227482 bp Feature: domain Description: GIIM Note: maturase Location: 227542-227767 bp Feature: domain Description: GIIM Note: maturase Location: 227542-227767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388)

Seq: JAAITZ010000006.1 Fusicatenibacter saccharivorans strain MSK.22.18 NODE_6_length_162417_cov_172.881, whole genome shotgun sequence (162417 bp)
Overview 1 RT 1: 148834-153337 bp Neighborhood of RT #1 [148834, 153372] LacZ PRK10572 PRK10572 RVT-GII PolyPPase_VTC_like Feature: gene Location: 148834-150552 bp Feature: domain Description: LacZ Location: 148885-150151 bp Feature: domain Description: LacZ Location: 148885-150151 bp Feature: gene Location: 150699-151541 bp Feature: domain Description: PRK10572 Location: 150855-150990 bp Feature: domain Description: PRK10572 Location: 150855-150990 bp Feature: domain Description: PRK10572 Location: 151191-151515 bp Feature: domain Description: PRK10572 Location: 151191-151515 bp Feature: gene Location: 151661-152152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151955-152144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151955-152 144 bp Feature: gene Location: 152169-152456 bp Feature: gene Location: 152677-153372 bp Feature: domain Description: PolyPPase_VTC_like Location: 152695-153337 bp Feature: domain Description: PolyPPase_VTC_like Location: 152 695-153337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacZ (COG3250), PRK10572 (arabinose operon transcriptional regulator AraC), RVT-GII, PolyPPase_VTC_like (cd07750)