myRT

myRT report for GCA_013300855.1_ASM1330085v1

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Seq: JAAINB010000010.1 Blautia wexlerae strain MSK.20.14 NODE_10_length_108791_cov_155.137, whole genome shotgun sequence (108791 bp)
Overview 1 RT 1: 12839-18289 bp 2 RT 2: 80767-84821 bp 3 RT 3: 107019-108743 bp Neighborhood of RT #1 [12839, 18294] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C Maff2 Neighborhood of RT #2 [80767, 84868] KOG3215 RVT-GII Intron_maturas2 Relaxase Neighborhood of RT #3 [107019, 108772] TnpV RVT-GII Feature: gene Location: 12839-13330 bp Feature: domain Description: DUF3801 Location: 12905-13298 bp Feature: domain Description: DUF3801 Location: 1 2905-1 3298 bp Feature: gene Location: 13327-14256 bp Feature: domain Description: VirD4 Location: 13588-13945 bp Feature: domain Description: VirD4 Location: 1 3588-1 3945 bp Feature: domain Description: VirD4 Location: 14041-14194 bp Feature: domain Description: VirD4 Location: 1 4041 -1 41 94 bp Feature: gene Location: 14881-16788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15211-15955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 521 1 -1 5955 bp Feature: gene Location: 16933-17955 bp Feature: domain Description: TraG-D_C Location: 17401-17755 bp Feature: domain Description: TraG-D_C Location: 1 7401 -1 7755 bp Feature: gene Location: 18079-18294 bp Feature: domain Description: Maff2 Location: 18082-18289 bp Feature: domain Description: Maff2 Location: 1 8082-1 8289 bp Feature: gene Location: 80767-81003 bp Feature: gene Location: 81019-81936 bp Feature: domain Description: KOG3215 Location: 81448-81640 bp Feature: domain Description: KOG321 5 Location: 81 448-81 640 bp Feature: gene Location: 82150-83967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82414-83236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8241 4-83236 bp Feature: domain Description: Intron_maturas2 Location: 83311-83614 bp Feature: domain Description: Intron_maturas2 Location: 8331 1 -8361 4 bp Feature: gene Location: 84160-84453 bp Feature: gene Location: 84470-84868 bp Feature: domain Description: Relaxase Location: 84512-84821 bp Feature: domain Description: Relaxase Location: 8451 2-84821 bp Feature: gene Location: 107019-107471 bp Feature: domain Description: TnpV Location: 107139-107463 bp Feature: domain Description: TnpV Location: 1 071 39-1 07463 bp Feature: gene Location: 107763-107936 bp Feature: gene Location: 107939-108772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108242-108743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08242-1 08743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Maff2 (pfam12750), KOG3215 (KOG3215, Uncharacterized conserved protein ), Intron_maturas2 (pfam01348), Relaxase (pfam03432), TnpV (pfam14198)

Seq: JAAINB010000013.1 Blautia wexlerae strain MSK.20.14 NODE_13_length_98623_cov_293.672, whole genome shotgun sequence (98623 bp)
Overview 1 RT 1: 465-5229 bp Neighborhood of RT #1 [465, 5255] RVT-GII GIIM Glyco_hydro_39 YesM Feature: gene Location: 465-1772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696-1323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696-132 3 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1599 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1599 bp Feature: gene Location: 1960-3471 bp Feature: domain Description: Glyco_hydro_39 Location: 2005-3466 bp Feature: domain Description: Glyco_hydro_39 Location: 2 005-3466 bp Feature: gene Location: 3492-5255 bp Feature: domain Description: YesM Location: 3978-5229 bp Feature: domain Description: YesM Location: 3978-52 2 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_39 (pfam01229), YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JAAINB010000029.1 Blautia wexlerae strain MSK.20.14 NODE_29_length_39598_cov_140.093, whole genome shotgun sequence (39598 bp)
Overview 1 RT 1: 5149-19896 bp Neighborhood of RT #1 [5149, 20300] ArdC YodL DUF3849 LPD18 LPD16 LPD16 KOG1000 RVT-GII Intron_maturas2 HNHc AdoMet_MTases COG4646 Feature: gene Location: 5149-9981 bp Feature: domain Description: ArdC Location: 5371-5962 bp Feature: domain Description: ArdC Location: 53 71-5962 bp Feature: domain Description: YodL Location: 6667-6958 bp Feature: domain Description: YodL Location: 6667-6958 bp Feature: domain Description: DUF3849 Location: 7015-7390 bp Feature: domain Description: DUF3 849 Location: 7015-73 90 bp Feature: domain Description: LPD18 Location: 7429-7675 bp Feature: domain Description: LPD18 Location: 7429-7675 bp Feature: domain Description: LPD16 Location: 8185-8413 bp Feature: domain Description: LPD16 Location: 8185-8413 bp Feature: domain Description: LPD16 Location: 8533-8740 bp Feature: domain Description: LPD16 Location: 853 3 -8740 bp Feature: gene Location: 10021-11142 bp Feature: domain Description: KOG1000 Location: 10069-10267 bp Feature: domain Description: KOG1000 Location: 10069-10267 bp Feature: gene Location: 11202-13016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11466-12288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11466-12288 bp Feature: domain Description: Intron_maturas2 Location: 12360-12792 bp Feature: domain Description: Intron_maturas2 Location: 123 60-12792 bp Feature: domain Description: HNHc Note: nucleases Location: 12843-12987 bp Feature: domain Description: HNHc Note: nucleases Location: 12843 -12987 bp Feature: gene Location: 13249-13443 bp Feature: gene Location: 13566-20300 bp Feature: domain Description: AdoMet_MTases Location: 16791-17133 bp Feature: domain Description: AdoMet_MTases Location: 16791-1713 3 bp Feature: domain Description: COG4646 Location: 17337-19896 bp Feature: domain Description: COG4646 Location: 173 3 7-19896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AdoMet_MTases (cl17173), COG4646 (Adenine-specific DNA methylase, N12 class ), ArdC (COG4227), YodL (pfam14191), DUF3849 (pfam12960), LPD18 (pfam18832)
LPD16 (pfam18830)

Seq: JAAINB010000045.1 Blautia wexlerae strain MSK.20.14 NODE_45_length_20733_cov_108.468, whole genome shotgun sequence (20733 bp)
Overview 1 RT 1: 20-2212 bp Neighborhood of RT #1 [20, 2212] RVT-GII RVT-GII Feature: gene Location: 20-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26-191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26-191 bp Feature: gene Location: 232-798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487-766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 87-766 bp Feature: gene Location: 807-1136 bp Feature: gene Location: 1520-2212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAINB010000058.1 Blautia wexlerae strain MSK.20.14 NODE_58_length_9626_cov_253.652, whole genome shotgun sequence (9626 bp)
Overview 1 RT 1: 2053-5201 bp Neighborhood of RT #1 [2053, 5218] DUF3784 RVT-DGRs LysR PRK10323 Feature: gene Location: 2053-2355 bp Feature: domain Description: DUF3784 Location: 2074-2326 bp Feature: domain Description: DUF3784 Location: 2074-2326 bp Feature: gene Location: 2568-2939 bp Feature: gene Location: 3212-3601 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3224-3359 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3224-335 9 bp Feature: gene Location: 3636-4544 bp Feature: domain Description: LysR Location: 3639-4530 bp Feature: domain Description: LysR Location: 3639-45 30 bp Feature: gene Location: 4580-5218 bp Feature: domain Description: PRK10323 Location: 4646-5201 bp Feature: domain Description: PRK10323 Location: 4646-5 201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3784 (pfam12650), RVT-DGRs, LysR (COG0583), PRK10323 (cysteine/O-acetylserine transporter)

Seq: JAAINB010000006.1 Blautia wexlerae strain MSK.20.14 NODE_6_length_141271_cov_174.339, whole genome shotgun sequence (141271 bp)
Overview 1 RT 1: 1898-6309 bp Neighborhood of RT #1 [1898, 6320] YccF RVT_N RVT-GII GIIM RAYT IS285 Feature: gene Location: 1898-2122 bp Feature: domain Description: YccF Location: 1958-2105 bp Feature: domain Description: YccF Location: 1958-2105 bp Feature: gene Location: 2145-2489 bp Feature: gene Location: 2930-4462 bp Feature: RT Description: RVT_N Location: 3014-3257 bp Feature: RT Description: RVT_N Location: 3014-3257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3305-3959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3305-3959 bp Feature: domain Description: GIIM Note: maturase Location: 4013-4244 bp Feature: domain Description: GIIM Note: maturase Location: 4013-4244 bp Feature: gene Location: 4615-4881 bp Feature: domain Description: RAYT Location: 4621-4876 bp Feature: domain Description: RAYT Location: 46 21-4876 bp Feature: gene Location: 5106-6320 bp Feature: domain Description: IS285 Location: 5139-6309 bp Feature: domain Description: IS285 Location: 5139-6 309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccF (pfam03733), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RAYT (COG1943), IS285 (COG3328)

Seq: JAAINB010000077.1 Blautia wexlerae strain MSK.20.14 NODE_78_length_1880_cov_297.19, whole genome shotgun sequence (1880 bp)
Overview 1 RT 1: 143-1724 bp Neighborhood of RT #1 [143, 1813] RVT-GII GIIM Feature: gene Location: 143-286 bp Feature: gene Location: 338-526 bp Feature: gene Location: 557-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 61-1418 bp Feature: domain Description: GIIM Note: maturase Location: 1502-1724 bp Feature: domain Description: GIIM Note: maturase Location: 1502-17 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAINB010000009.1 Blautia wexlerae strain MSK.20.14 NODE_9_length_109742_cov_143.03, whole genome shotgun sequence (109742 bp)
Overview 1 RT 1: 78163-80999 bp Neighborhood of RT #1 [78163, 80999] RVT-GII RVT-GII GIIM AAA_21 Feature: gene Location: 78163-78354 bp Feature: gene Location: 78497-78640 bp Feature: gene Location: 78649-79221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78904-79192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78 904-79192 bp Feature: gene Location: 79318-79950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79384-79594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7938 4-79594 bp Feature: domain Description: GIIM Note: maturase Location: 79675-79879 bp Feature: domain Description: GIIM Note: maturase Location: 79675-798 79 bp Feature: gene Location: 80245-80433 bp Feature: domain Description: AAA_21 Location: 80275-80416 bp Feature: domain Description: AAA_21 Location: 8 0275-8 0416 bp Feature: gene Location: 80478-80999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AAA_21 (pfam13304)