myRT

myRT report for GCA_013300975.1_ASM1330097v1

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Seq: JAAINQ010000011.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_11_length_121983_cov_130.724, whole genome shotgun sequence (121983 bp)
Overview 1 RT 1: 110522-114262 bp Neighborhood of RT #1 [110522, 114264] AAA-ATPase_like PDDEXK_9 RVT-GII INT_RitC_C_like xerC Feature: gene Location: 110522-111964 bp Feature: domain Description: AAA-ATPase_like Location: 110528-111173 bp Feature: domain Description: AAA-ATPase_like Location: 1 1 0528-1 1 1 1 73 bp Feature: domain Description: PDDEXK_9 Location: 111650-111950 bp Feature: domain Description: PDDEXK_9 Location: 1 1 1 650-1 1 1 950 bp Feature: gene Location: 112186-112437 bp Feature: gene Location: 112440-113204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112755-113136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2755-1 1 31 36 bp Feature: gene Location: 113251-113682 bp Feature: domain Description: INT_RitC_C_like Location: 113257-113596 bp Feature: domain Description: INT_RitC_C_like Location: 1 1 3257-1 1 3596 bp Feature: gene Location: 113773-114264 bp Feature: domain Description: xerC Location: 113791-114262 bp Feature: domain Description: xerC Location: 1 1 3791 -1 1 4262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-GII, INT_RitC_C_like (cd01182), xerC (PRK01287)

Seq: JAAINQ010000016.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_16_length_91012_cov_160.464, whole genome shotgun sequence (91012 bp)
Overview 1 RT 1: 51166-55984 bp Neighborhood of RT #1 [51166, 55992] repA HTH_LUXR TraG_VirD4 RVT_N RVT-GII RVT-GII GIIM TraG-D_C TnpV Feature: gene Location: 51166-51738 bp Feature: domain Description: repA Location: 51181-51376 bp Feature: domain Description: repA Location: 51181-51376 bp Feature: domain Description: HTH_LUXR Location: 51538-51676 bp Feature: domain Description: HTH_LUXR Location: 51538-51676 bp Feature: gene Location: 51924-52262 bp Feature: domain Description: TraG_VirD4 Location: 51969-52146 bp Feature: domain Description: TraG_VirD4 Location: 51969-52 146 bp Feature: gene Location: 52845-53636 bp Feature: RT Description: RVT_N Location: 52890-53133 bp Feature: RT Description: RVT_N Location: 52 890-53133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53178-53493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53178-53493 bp Feature: gene Location: 53452-54510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53455-53830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53455-53830 bp Feature: domain Description: GIIM Note: maturase Location: 53881-54115 bp Feature: domain Description: GIIM Note: maturase Location: 53881-54115 bp Feature: gene Location: 54654-55562 bp Feature: domain Description: TraG-D_C Location: 55194-55482 bp Feature: domain Description: TraG-D_C Location: 55194-55482 bp Feature: gene Location: 55615-55992 bp Feature: domain Description: TnpV Location: 55660-55984 bp Feature: domain Description: TnpV Location: 55660-55984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT repA, HTH_LUXR (smart00421), TraG_VirD4, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), TnpV (pfam14198)

Seq: JAAINQ010000039.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_39_length_14236_cov_146.274, whole genome shotgun sequence (14236 bp)
Overview 1 RT 1: 237-4738 bp Neighborhood of RT #1 [237, 4770] RVT-GII IS285 pfam13191 TPR Feature: gene Location: 237-689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-615 bp Feature: gene Location: 920-2161 bp Feature: domain Description: IS285 Location: 992-2153 bp Feature: domain Description: IS285 Location: 992-2153 bp Feature: gene Location: 2413-4770 bp Feature: domain Description: pfam13191 Location: 2920-3073 bp Feature: domain Description: pfam13 191 Location: 2920-3 073 bp Feature: domain Description: TPR Location: 4054-4738 bp Feature: domain Description: TPR Location: 4054-473 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pfam13191 (AAA_16;AAA ATPase domain), TPR (smart00028), IS285 (COG3328)

Seq: JAAINQ010000054.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_55_length_3933_cov_146.162, whole genome shotgun sequence (3933 bp)
Overview 1 RT 1: 123-3458 bp Neighborhood of RT #1 [123, 3511] HTH_XRE RVT-GII VanZ Feature: gene Location: 123-956 bp Feature: domain Description: HTH_XRE Location: 177-348 bp Feature: domain Description: HTH_XRE Location: 177-34 8 bp Feature: gene Location: 1132-2427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1387-2077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1387-2077 bp Feature: gene Location: 2517-2762 bp Feature: gene Location: 2918-3511 bp Feature: domain Description: VanZ Location: 2966-3458 bp Feature: domain Description: VanZ Location: 2966-34 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_XRE (smart00530), VanZ (pfam04892)

Seq: JAAINQ010000073.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_74_length_1692_cov_201.091, whole genome shotgun sequence (1692 bp)
Overview 1 RT 1: 3-826 bp Neighborhood of RT #1 [3, 1140] RVT-GII MFS Feature: gene Location: 3-275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-237 bp Feature: gene Location: 309-491 bp Feature: gene Location: 577-1140 bp Feature: domain Description: MFS Location: 592-826 bp Feature: domain Description: MFS Location: 5 92-826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MFS (cl28910)

Seq: JAAINQ010000083.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_84_length_1205_cov_779.185, whole genome shotgun sequence (1205 bp)
Overview 1 RT 1: 495-1200 bp Neighborhood of RT #1 [495, 1202] RVT-GII Feature: gene Location: 495-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAINQ010000097.1 Fusicatenibacter saccharivorans strain MSK.22.74 NODE_98_length_708_cov_367.032, whole genome shotgun sequence (708 bp)
Overview 1 RT 1: 3-441 bp Neighborhood of RT #1 [3, 455] RVT-GII Feature: gene Location: 3-455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII