myRT

myRT report for GCA_013301075.1_ASM1330107v1

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Seq: JAAIUG010000100.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_101_length_708_cov_466.671, whole genome shotgun sequence (708 bp)
Overview 1 RT 1: 254-692 bp Neighborhood of RT #1 [254, 706] RVT-GII Feature: gene Location: 254-706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIUG010000014.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_14_length_91016_cov_193.456, whole genome shotgun sequence (91016 bp)
Overview 1 RT 1: 51166-55984 bp Neighborhood of RT #1 [51166, 55992] repA HTH_LUXR TraG_VirD4 RVT_N RVT-GII RVT-GII GIIM TraG-D_C TnpV Feature: gene Location: 51166-51738 bp Feature: domain Description: repA Location: 51181-51376 bp Feature: domain Description: repA Location: 51181-51376 bp Feature: domain Description: HTH_LUXR Location: 51538-51676 bp Feature: domain Description: HTH_LUXR Location: 51538-51676 bp Feature: gene Location: 51924-52262 bp Feature: domain Description: TraG_VirD4 Location: 51969-52146 bp Feature: domain Description: TraG_VirD4 Location: 51969-52 146 bp Feature: gene Location: 52845-53636 bp Feature: RT Description: RVT_N Location: 52890-53133 bp Feature: RT Description: RVT_N Location: 52 890-53133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53178-53493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53178-53493 bp Feature: gene Location: 53452-54510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53455-53830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53455-53830 bp Feature: domain Description: GIIM Note: maturase Location: 53881-54115 bp Feature: domain Description: GIIM Note: maturase Location: 53881-54115 bp Feature: gene Location: 54654-55562 bp Feature: domain Description: TraG-D_C Location: 55194-55482 bp Feature: domain Description: TraG-D_C Location: 55194-55482 bp Feature: gene Location: 55615-55992 bp Feature: domain Description: TnpV Location: 55660-55984 bp Feature: domain Description: TnpV Location: 55660-55984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT repA, HTH_LUXR (smart00421), TraG_VirD4, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), TnpV (pfam14198)

Seq: JAAIUG010000042.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_42_length_14269_cov_185.245, whole genome shotgun sequence (14269 bp)
Overview 1 RT 1: 270-4771 bp Neighborhood of RT #1 [270, 4803] RVT-GII IS285 pfam13191 TPR Feature: gene Location: 270-722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588-648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588-648 bp Feature: gene Location: 953-2194 bp Feature: domain Description: IS285 Location: 1025-2186 bp Feature: domain Description: IS285 Location: 1025-2186 bp Feature: gene Location: 2446-4803 bp Feature: domain Description: pfam13191 Location: 2953-3106 bp Feature: domain Description: pfam13 191 Location: 2953 -3 106 bp Feature: domain Description: TPR Location: 4087-4771 bp Feature: domain Description: TPR Location: 4087-4771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam13191 (AAA_16;AAA ATPase domain), TPR (smart00028), RVT-GII, IS285 (COG3328)

Seq: JAAIUG010000056.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_57_length_3688_cov_175.273, whole genome shotgun sequence (3688 bp)
Overview 1 RT 1: 3-3176 bp Neighborhood of RT #1 [3, 3229] RVT-GII VanZ Feature: gene Location: 3-674 bp Feature: gene Location: 850-2145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1795 bp Feature: gene Location: 2235-2480 bp Feature: gene Location: 2636-3229 bp Feature: domain Description: VanZ Location: 2684-3176 bp Feature: domain Description: VanZ Location: 2684 -3176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VanZ (pfam04892), RVT-GII

Seq: JAAIUG010000074.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_75_length_1851_cov_968.241, whole genome shotgun sequence (1851 bp)
Overview 1 RT 1: 495-1611 bp Neighborhood of RT #1 [495, 1772] RVT-GII GIIM Feature: gene Location: 495-1772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: domain Description: GIIM Note: maturase Location: 1389-1611 bp Feature: domain Description: GIIM Note: maturase Location: 1389-1611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAIUG010000077.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_78_length_1692_cov_252.99, whole genome shotgun sequence (1692 bp)
Overview 1 RT 1: 3-826 bp Neighborhood of RT #1 [3, 1140] RVT-GII MFS Feature: gene Location: 3-275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 -237 bp Feature: gene Location: 309-491 bp Feature: gene Location: 577-1140 bp Feature: domain Description: MFS Location: 592-826 bp Feature: domain Description: MFS Location: 592-826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MFS (cl28910)

Seq: JAAIUG010000007.1 Fusicatenibacter saccharivorans strain MSK.22.1 NODE_7_length_135894_cov_157.935, whole genome shotgun sequence (135894 bp)
Overview 1 RT 1: 124433-128173 bp Neighborhood of RT #1 [124433, 128175] AAA-ATPase_like PDDEXK_9 RVT-GII INT_RitC_C_like xerC Feature: gene Location: 124433-125875 bp Feature: domain Description: AAA-ATPase_like Location: 124439-125084 bp Feature: domain Description: AAA-ATPase_like Location: 124439-125084 bp Feature: domain Description: PDDEXK_9 Location: 125561-125861 bp Feature: domain Description: PDDEXK_9 Location: 125561-125861 bp Feature: gene Location: 126097-126348 bp Feature: gene Location: 126351-127115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126666-127047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126666-127 047 bp Feature: gene Location: 127162-127593 bp Feature: domain Description: INT_RitC_C_like Location: 127168-127507 bp Feature: domain Description: INT_RitC_C_like Location: 127 168-127 507 bp Feature: gene Location: 127684-128175 bp Feature: domain Description: xerC Location: 127702-128173 bp Feature: domain Description: xerC Location: 127 7 02-12817 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-GII, INT_RitC_C_like (cd01182), xerC (PRK01287)