myRT

myRT report for GCA_013301195.1_ASM1330119v1

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Seq: JAAWUY010000106.1 Faecalicatena fissicatena strain MSK.14.20 NODE_107_length_952_cov_2349.01, whole genome shotgun sequence (952 bp)
Overview 1 RT 1: 73-775 bp Neighborhood of RT #1 [73, 951] RVT-GII GIIM Feature: gene Location: 73-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-499 bp Feature: domain Description: GIIM Note: maturase Location: 556-775 bp Feature: domain Description: GIIM Note: maturase Location: 556-775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAWUY010000111.1 Faecalicatena fissicatena strain MSK.14.20 NODE_112_length_816_cov_248.455, whole genome shotgun sequence (816 bp)
Overview 1 RT 1: 3-816 bp Neighborhood of RT #1 [3, 815] RVT-GII Feature: gene Location: 3-815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 -816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAWUY010000125.1 Faecalicatena fissicatena strain MSK.14.20 NODE_126_length_572_cov_2195.74, whole genome shotgun sequence (572 bp)
Overview 1 RT 1: 3-567 bp Neighborhood of RT #1 [3, 569] RVT-GII Feature: gene Location: 3-569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 21-567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAWUY010000029.1 Faecalicatena fissicatena strain MSK.14.20 NODE_29_length_38067_cov_296.431, whole genome shotgun sequence (38067 bp)
Overview 1 RT 1: 35253-38065 bp Neighborhood of RT #1 [35253, 38065] STE14 TfoX RVT-GII GIIM Feature: gene Location: 35253-35618 bp Feature: domain Description: STE14 Location: 35265-35424 bp Feature: domain Description: STE14 Location: 35265-354 24 bp Feature: gene Location: 35799-36119 bp Feature: domain Description: TfoX Location: 35802-36030 bp Feature: domain Description: TfoX Location: 35802-36030 bp Feature: gene Location: 36225-37523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36480-37173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364 80-37173 bp Feature: domain Description: GIIM Note: maturase Location: 37233-37452 bp Feature: domain Description: GIIM Note: maturase Location: 37233-374 52 bp Feature: gene Location: 37574-37747 bp Feature: gene Location: 37751-38065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STE14 (COG2020), TfoX (COG3070), RVT-GII, GIIM (pfam08388)

Seq: JAAWUY010000053.1 Faecalicatena fissicatena strain MSK.14.20 NODE_53_length_23886_cov_250.887, whole genome shotgun sequence (23886 bp)
Overview 1 RT 1: 17077-20518 bp Neighborhood of RT #1 [17077, 20518] LytT HTH_3 RVT-GII GIIM Feature: gene Location: 17077-17805 bp Feature: domain Description: LytT Location: 17080-17701 bp Feature: domain Description: LytT Location: 17080-17701 bp Feature: gene Location: 17783-18163 bp Feature: domain Description: HTH_3 Location: 17798-17960 bp Feature: domain Description: HTH_3 Location: 17798-17960 bp Feature: gene Location: 18340-19644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18541-19159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185 41-1915 9 bp Feature: domain Description: GIIM Note: maturase Location: 19213-19429 bp Feature: domain Description: GIIM Note: maturase Location: 19213-19429 bp Feature: gene Location: 19999-20136 bp Feature: gene Location: 20228-20518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LytT (COG3279), HTH_3 (pfam01381), RVT-GII, GIIM (pfam08388)

Seq: JAAWUY010000066.1 Faecalicatena fissicatena strain MSK.14.20 NODE_66_length_13390_cov_327.999, whole genome shotgun sequence (13390 bp)
Overview 1 RT 1: 10572-13342 bp Neighborhood of RT #1 [10572, 13386] Acetyltransf_1 RVT-GII PRK10562 Feature: gene Location: 10572-11093 bp Feature: domain Description: Acetyltransf_1 Location: 10698-11013 bp Feature: domain Description: Acetyltransf_1 Location: 106 98-11013 bp Feature: gene Location: 11256-11477 bp Feature: gene Location: 11591-12886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11846-12536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11846 -12536 bp Feature: gene Location: 13018-13386 bp Feature: domain Description: PRK10562 Location: 13021-13342 bp Feature: domain Description: PRK1056 2 Location: 13021-13342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, PRK10562 (putative acetyltransferase; Provisional)