myRT

myRT report for GCA_013301305.1_ASM1330130v1

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Seq: JAAIOB010000033.1 Dorea longicatena strain MSK.11.14 NODE_33_length_27459_cov_221.902, whole genome shotgun sequence (27459 bp)
Overview 1 RT 1: 2912-6154 bp Neighborhood of RT #1 [2912, 6192] Acetyltransf_1 RVT-GII PRK10562 ATC_hydrolase Feature: gene Location: 2912-3433 bp Feature: domain Description: Acetyltransf_1 Location: 3038-3353 bp Feature: domain Description: Acetyltransf_1 Location: 3038-3353 bp Feature: gene Location: 3596-3841 bp Feature: gene Location: 3931-5226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4186-4876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 86-4876 bp Feature: gene Location: 5358-5783 bp Feature: domain Description: PRK10562 Location: 5361-5778 bp Feature: domain Description: PRK1 0562 Location: 5361 -5778 bp Feature: gene Location: 5878-6192 bp Feature: domain Description: ATC_hydrolase Location: 5941-6154 bp Feature: domain Description: ATC_hydrolase Location: 5941 -61 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, PRK10562 (putative acetyltransferase; Provisional), ATC_hydrolase (pfam14196)

Seq: JAAIOB010000036.1 Dorea longicatena strain MSK.11.14 NODE_36_length_24208_cov_296.897, whole genome shotgun sequence (24208 bp)
Overview 1 RT 1: 15261-24063 bp Neighborhood of RT #1 [15261, 24206] YodL LPD16 DUF4316 LPD25 KOG1000 RVT-GII Intron_maturas2 HNHc COG4646 Feature: gene Location: 15261-18053 bp Feature: domain Description: YodL Location: 16080-16374 bp Feature: domain Description: YodL Location: 16080-16374 bp Feature: domain Description: LPD16 Location: 16404-16626 bp Feature: domain Description: LPD16 Location: 16404-1662 6 bp Feature: domain Description: DUF4316 Location: 16674-16758 bp Feature: domain Description: DUF4316 Location: 16674-16758 bp Feature: domain Description: LPD25 Location: 17367-17658 bp Feature: domain Description: LPD2 5 Location: 17367-17658 bp Feature: gene Location: 18096-19508 bp Feature: domain Description: KOG1000 Location: 18468-18678 bp Feature: domain Description: KOG1000 Location: 18468-18678 bp Feature: gene Location: 19637-21424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19907-20699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19907-2 0699 bp Feature: domain Description: Intron_maturas2 Location: 20804-21020 bp Feature: domain Description: Intron_maturas2 Location: 2 0804-2 102 0 bp Feature: domain Description: HNHc Note: nucleases Location: 21200-21386 bp Feature: domain Description: HNHc Note: nucleases Location: 2 12 00-2 1386 bp Feature: gene Location: 21499-21744 bp Feature: gene Location: 21915-24206 bp Feature: domain Description: COG4646 Location: 21993-24063 bp Feature: domain Description: COG4646 Location: 2 1993-2 4063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: JAAIOB010000054.1 Dorea longicatena strain MSK.11.14 NODE_55_length_2824_cov_567.169, whole genome shotgun sequence (2824 bp)
Overview 1 RT 1: 91-2814 bp Neighborhood of RT #1 [91, 2822] RVT-GII Intron_maturas2 Feature: gene Location: 91-762 bp Feature: gene Location: 877-1092 bp Feature: gene Location: 1338-2822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602-2433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602-243 3 bp Feature: domain Description: Intron_maturas2 Location: 2505-2814 bp Feature: domain Description: Intron_maturas2 Location: 2505-2814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)