myRT

myRT report for GCA_013301945.1_ASM1330194v1

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Seq: JAAIPI010000022.1 Blautia wexlerae strain MSK.17.7 NODE_22_length_62920_cov_174.847, whole genome shotgun sequence (62920 bp)
Overview 1 RT 1: 119-2316 bp Neighborhood of RT #1 [119, 2843] RVT-GII GIIM GAT1_Peptidase_E OAD_beta Feature: gene Location: 119-1417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-1 067 bp Feature: domain Description: GIIM Note: maturase Location: 1127-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 27-1 346 bp Feature: gene Location: 1528-2145 bp Feature: domain Description: GAT1_Peptidase_E Location: 1546-2008 bp Feature: domain Description: GAT1 _Peptidase_E Location: 1 546-2008 bp Feature: gene Location: 2193-2843 bp Feature: domain Description: OAD_beta Location: 2208-2316 bp Feature: domain Description: OAD_beta Location: 2208-231 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GAT1_Peptidase_E (cd03146), OAD_beta (pfam03977)

Seq: JAAIPI010000023.1 Blautia wexlerae strain MSK.17.7 NODE_23_length_61930_cov_438.749, whole genome shotgun sequence (61930 bp)
Overview 1 RT 1: 48264-56226 bp Neighborhood of RT #1 [48264, 56226] NifX SlpA COG5263 MurNAc-LAA RVT-GII GIIM Feature: gene Location: 48264-49127 bp Feature: domain Description: NifX Location: 48267-48600 bp Feature: domain Description: NifX Location: 482 67-48600 bp Feature: domain Description: SlpA Location: 48717-49122 bp Feature: domain Description: SlpA Location: 48717-4912 2 bp Feature: gene Location: 49200-50168 bp Feature: domain Description: COG5263 Location: 49308-49542 bp Feature: domain Description: COG52 63 Location: 49308-49542 bp Feature: domain Description: MurNAc-LAA Location: 49551-50151 bp Feature: domain Description: MurNAc-LAA Location: 49551-50151 bp Feature: gene Location: 50324-51718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50642-51266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50642 -512 66 bp Feature: domain Description: GIIM Note: maturase Location: 51323-51545 bp Feature: domain Description: GIIM Note: maturase Location: 5132 3-51545 bp Feature: gene Location: 51828-52136 bp Feature: gene Location: 52237-56226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifX (COG1433), SlpA (COG1047), COG5263 (Glucan-binding domain (YG repeat) ), MurNAc-LAA (cl02713), RVT-GII, GIIM (pfam08388)

Seq: JAAIPI010000034.1 Blautia wexlerae strain MSK.17.7 NODE_34_length_41380_cov_236.696, whole genome shotgun sequence (41380 bp)
Overview 1 RT 1: 603-10232 bp Neighborhood of RT #1 [603, 10237] Nitroreductase_3 RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII GIIM chaperone_ClpB DUF4250 Feature: gene Location: 603-1121 bp Feature: domain Description: Nitroreductase_3 Location: 615-1101 bp Feature: domain Description: Nitroreductase_3 Location: 615-1101 bp Feature: gene Location: 1514-1642 bp Feature: gene Location: 2177-2965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2510-2897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2510-2897 bp Feature: gene Location: 3010-3912 bp Feature: domain Description: Phage_int_SAM_1 Location: 3019-3199 bp Feature: domain Description: Phage_int_SAM_1 Location: 3 019-3 199 bp Feature: domain Description: INT_RitC_C_like Location: 3280-3826 bp Feature: domain Description: INT_RitC_C_like Location: 3 280-3 826 bp Feature: gene Location: 4004-4987 bp Feature: domain Description: INT_RitB_C_like Location: 4340-4925 bp Feature: domain Description: INT_RitB_C_like Location: 43 40-4925 bp Feature: gene Location: 4980-6215 bp Feature: domain Description: Phage_int_SAM_1 Location: 5334-5556 bp Feature: domain Description: Phage_int_SAM_1 Location: 53 3 4-5556 bp Feature: domain Description: INT_RitA_C_like Location: 5649-6189 bp Feature: domain Description: INT_RitA_C_like Location: 5649-6189 bp Feature: gene Location: 6410-7039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6422-6677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6422-6677 bp Feature: domain Description: GIIM Note: maturase Location: 6740-6950 bp Feature: domain Description: GIIM Note: maturase Location: 6740-6950 bp Feature: gene Location: 7472-10063 bp Feature: domain Description: chaperone_ClpB Location: 7490-10037 bp Feature: domain Description: chaperone_ClpB Location: 7490-1003 7 bp Feature: gene Location: 10064-10237 bp Feature: domain Description: DUF4250 Location: 10070-10232 bp Feature: domain Description: DUF4250 Location: 10070-1023 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), Nitroreductase_3, DUF4250 (pfam14056), INT_RitA_C_like (cd01188), GIIM (pfam08388), chaperone_ClpB (TIGR03346)

Seq: JAAIPI010000054.1 Blautia wexlerae strain MSK.17.7 NODE_54_length_24851_cov_269.422, whole genome shotgun sequence (24851 bp)
Overview 1 RT 1: 2392-5280 bp Neighborhood of RT #1 [2392, 6824] RVT-DGRs SMC_prok_B Feature: gene Location: 2392-2586 bp Feature: gene Location: 2579-2932 bp Feature: gene Location: 2877-4106 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3159-3825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3159-3825 bp Feature: gene Location: 4133-4282 bp Feature: gene Location: 4521-6824 bp Feature: domain Description: SMC_prok_B Location: 4557-5280 bp Feature: domain Description: SMC_prok_B Location: 4 557-5280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, SMC_prok_B (TIGR02168)

Seq: JAAIPI010000056.1 Blautia wexlerae strain MSK.17.7 NODE_56_length_23138_cov_268.729, whole genome shotgun sequence (23138 bp)
Overview 1 RT 1: 425-4876 bp Neighborhood of RT #1 [425, 5007] UDP_GE_SDE_e AbiH RVT-GII GIIM LbH_MAT_like Feature: gene Location: 425-1513 bp Feature: domain Description: UDP_GE_SDE_e Location: 461-1505 bp Feature: domain Description: UDP_GE_SDE_e Location: 461-15 05 bp Feature: gene Location: 1679-1903 bp Feature: domain Description: AbiH Location: 1688-1811 bp Feature: domain Description: AbiH Location: 1688-1811 bp Feature: gene Location: 2464-3861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2815-3505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2815 -35 05 bp Feature: domain Description: GIIM Note: maturase Location: 3568-3787 bp Feature: domain Description: GIIM Note: maturase Location: 35 68-3787 bp Feature: gene Location: 4163-4462 bp Feature: gene Location: 4459-5007 bp Feature: domain Description: LbH_MAT_like Location: 4564-4876 bp Feature: domain Description: LbH_MAT_like Location: 45 64-4876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiH (pfam14253), RVT-GII, GIIM (pfam08388), UDP_GE_SDE_e (cd05253)

Seq: JAAIPI010000005.1 Blautia wexlerae strain MSK.17.7 NODE_5_length_107807_cov_184.134, whole genome shotgun sequence (107807 bp)
Overview 1 RT 1: 69133-83945 bp Neighborhood of RT #1 [69133, 85189] AdoMet_MTases COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 ArdC YodL DUF3849 LPD18 LPD16 LPD16 Feature: gene Location: 69133-76251 bp Feature: domain Description: AdoMet_MTases Location: 72742-73090 bp Feature: domain Description: AdoMet_MTases Location: 72742-73090 bp Feature: domain Description: COG4646 Location: 73288-75847 bp Feature: domain Description: COG46 46 Location: 73288-75847 bp Feature: gene Location: 76374-76568 bp Feature: gene Location: 76801-78615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77065-77887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7706 5-77887 bp Feature: domain Description: Intron_maturas2 Location: 77959-78391 bp Feature: domain Description: Intron_maturas2 Location: 77959-78391 bp Feature: domain Description: HNHc Note: nucleases Location: 78442-78586 bp Feature: domain Description: HNHc Note: nucleases Location: 78442-78586 bp Feature: gene Location: 78675-79796 bp Feature: domain Description: KOG1000 Location: 78723-78921 bp Feature: domain Description: KOG1000 Location: 78723-78921 bp Feature: gene Location: 79835-85189 bp Feature: domain Description: ArdC Location: 80057-80648 bp Feature: domain Description: ArdC Location: 80057-806 48 bp Feature: domain Description: YodL Location: 81875-82166 bp Feature: domain Description: YodL Location: 81875-8216 6 bp Feature: domain Description: DUF3849 Location: 82223-82598 bp Feature: domain Description: DUF3849 Location: 82223-82598 bp Feature: domain Description: LPD18 Location: 82637-82883 bp Feature: domain Description: LPD18 Location: 826 37-82883 bp Feature: domain Description: LPD16 Location: 83393-83621 bp Feature: domain Description: LPD16 Location: 83393-836 21 bp Feature: domain Description: LPD16 Location: 83747-83945 bp Feature: domain Description: LPD16 Location: 83747-83945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), ArdC (COG4227), YodL (pfam14191), DUF3849 (pfam12960), LPD18 (pfam18832)
LPD16 (pfam18830)