myRT

myRT report for GCA_013302135.1_ASM1330213v1

Download annotations/find similar RTs

Seq: JAAIPP010000025.1 Blautia wexlerae strain MSK.14.18 NODE_25_length_51468_cov_240.007, whole genome shotgun sequence (51468 bp)
Overview 1 RT 1: 41478-50918 bp Neighborhood of RT #1 [41478, 50938] chaperone_ClpB RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII Nitroreductase_3 Feature: gene Location: 41478-44069 bp Feature: domain Description: chaperone_ClpB Location: 41496-44043 bp Feature: domain Description: chaperone_ClpB Location: 41 496-44043 bp Feature: gene Location: 44175-44414 bp Feature: gene Location: 44502-45131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44514-44769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4451 4-44769 bp Feature: domain Description: GIIM Note: maturase Location: 44832-45042 bp Feature: domain Description: GIIM Note: maturase Location: 44832-45042 bp Feature: gene Location: 45326-46561 bp Feature: domain Description: Phage_int_SAM_1 Location: 45680-45902 bp Feature: domain Description: Phage_int_SAM_1 Location: 45680-45902 bp Feature: domain Description: INT_RitA_C_like Location: 45995-46535 bp Feature: domain Description: INT_RitA_C_like Location: 45995-46535 bp Feature: gene Location: 46554-47537 bp Feature: domain Description: INT_RitB_C_like Location: 46890-47475 bp Feature: domain Description: INT_RitB_C_like Location: 46890-47475 bp Feature: gene Location: 47629-48531 bp Feature: domain Description: Phage_int_SAM_1 Location: 47638-47818 bp Feature: domain Description: Phage_int_SAM_1 Location: 47638-4781 8 bp Feature: domain Description: INT_RitC_C_like Location: 47899-48445 bp Feature: domain Description: INT_RitC_C_like Location: 47899-48445 bp Feature: gene Location: 48576-49364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48909-49296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48909-49296 bp Feature: gene Location: 49899-50027 bp Feature: gene Location: 50420-50938 bp Feature: domain Description: Nitroreductase_3 Location: 50432-50918 bp Feature: domain Description: Nitroreductase_3 Location: 50432-5091 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT chaperone_ClpB (TIGR03346), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), Nitroreductase_3

Seq: JAAIPP010000029.1 Blautia wexlerae strain MSK.14.18 NODE_29_length_44123_cov_374.463, whole genome shotgun sequence (44123 bp)
Overview 1 RT 1: 3595-11095 bp Neighborhood of RT #1 [3595, 11481] HsdM HTH_26 RVT-GII GIIM YodL LPD16 DUF4316 LPD25 Feature: gene Location: 3595-6270 bp Feature: domain Description: HsdM Location: 3634-5074 bp Feature: domain Description: HsdM Location: 3634-5074 bp Feature: gene Location: 6295-6510 bp Feature: domain Description: HTH_26 Location: 6319-6496 bp Feature: domain Description: HTH_2 6 Location: 6319-6496 bp Feature: gene Location: 6829-8247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7180-7801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7180-7801 bp Feature: domain Description: GIIM Note: maturase Location: 7855-8083 bp Feature: domain Description: GIIM Note: maturase Location: 7855-8083 bp Feature: gene Location: 8261-8473 bp Feature: gene Location: 8731-11481 bp Feature: domain Description: YodL Location: 9511-9805 bp Feature: domain Description: YodL Location: 9511-9805 bp Feature: domain Description: LPD16 Location: 9835-10057 bp Feature: domain Description: LPD16 Location: 9835-10057 bp Feature: domain Description: DUF4316 Location: 10105-10189 bp Feature: domain Description: DUF4316 Location: 10105-10189 bp Feature: domain Description: LPD25 Location: 10798-11095 bp Feature: domain Description: LPD2 5 Location: 10798-11095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), HTH_26 (pfam13443), RVT-GII, GIIM (pfam08388), YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)

Seq: JAAIPP010000006.1 Blautia wexlerae strain MSK.14.18 NODE_6_length_133151_cov_194.067, whole genome shotgun sequence (133151 bp)
Overview 1 RT 1: 98666-104459 bp Neighborhood of RT #1 [98666, 104737] VanZ group_II_RT_mat RVT-GII GIIM RVT-GII DDE_Tnp_1 Feature: gene Location: 98666-99226 bp Feature: domain Description: VanZ Location: 98813-99191 bp Feature: domain Description: VanZ Location: 98813 -99191 bp Feature: gene Location: 99583-100065 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 99592-99967 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 99592-99967 bp Feature: gene Location: 100191-101447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100395-101052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003 95-101052 bp Feature: domain Description: GIIM Note: maturase Location: 101136-101349 bp Feature: domain Description: GIIM Note: maturase Location: 10113 6-1013 49 bp Feature: gene Location: 101478-101666 bp Feature: gene Location: 101718-101861 bp Feature: gene Location: 101968-102753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102223-102724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102223 -102724 bp Feature: gene Location: 103048-103368 bp Feature: gene Location: 103457-104737 bp Feature: domain Description: DDE_Tnp_1 Location: 103799-104459 bp Feature: domain Description: DDE_Tnp_1 Location: 103 799-104459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), VanZ (pfam04892), group_II_RT_mat (TIGR04416), DDE_Tnp_1 (pfam01609)