myRT

myRT report for GCA_013302195.1_ASM1330219v1

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Seq: JAAIPQ010000036.1 Blautia obeum strain MSK.20.67 NODE_36_length_21040_cov_260.232, whole genome shotgun sequence (21040 bp)
Overview 1 RT 1: 17167-20384 bp Neighborhood of RT #1 [17167, 20779] DUF3801 VirD4 RVT_N RVT-GII GIIM Feature: gene Location: 17167-17649 bp Feature: domain Description: DUF3801 Location: 17230-17614 bp Feature: domain Description: DUF3801 Location: 1 7230-1 761 4 bp Feature: gene Location: 17646-18533 bp Feature: domain Description: VirD4 Location: 18018-18357 bp Feature: domain Description: VirD4 Location: 1 801 8-1 8357 bp Feature: gene Location: 19115-20779 bp Feature: RT Description: RVT_N Location: 19160-19403 bp Feature: RT Description: RVT_N Location: 1 91 60-1 9403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19448-20099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9448-20099 bp Feature: domain Description: GIIM Note: maturase Location: 20150-20384 bp Feature: domain Description: GIIM Note: maturase Location: 201 50-20384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAIPQ010000004.1 Blautia obeum strain MSK.20.67 NODE_4_length_208542_cov_212.85, whole genome shotgun sequence (208542 bp)
Overview 1 RT 1: 71035-74562 bp Neighborhood of RT #1 [71035, 74651] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 Feature: gene Location: 71035-72177 bp Feature: domain Description: PHA00653 Location: 71158-72175 bp Feature: domain Description: PHA00653 Location: 71158-72 175 bp Feature: gene Location: 72218-72574 bp Feature: domain Description: Avd_like Location: 72248-72554 bp Feature: domain Description: Avd_like Location: 72 2 48-72 554 bp Feature: gene Location: 72901-73962 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 73138-73759 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 73138-73759 bp Feature: gene Location: 73987-74166 bp Feature: gene Location: 74163-74651 bp Feature: domain Description: Phage_holin_4_1 Location: 74202-74562 bp Feature: domain Description: Phage_holin_4_1 Location: 742 02 -74562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: JAAIPQ010000070.1 Blautia obeum strain MSK.20.67 NODE_71_length_2553_cov_916.919, whole genome shotgun sequence (2553 bp)
Overview 1 RT 1: 3-2109 bp Neighborhood of RT #1 [3, 2109] RVT-GII Feature: gene Location: 3-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 3 -1077 bp Feature: gene Location: 1864-2109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII