myRT

myRT report for GCA_013302375.1_ASM1330237v1

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Seq: JAAIPU010000018.1 Blautia faecis strain MSK.14.13 NODE_18_length_74521_cov_176.187, whole genome shotgun sequence (74521 bp)
Overview 1 RT 1: 59711-64382 bp Neighborhood of RT #1 [59711, 64408] VOC Zn_ADH7 RVT-GII GIIM NagC Feature: gene Location: 59711-60103 bp Feature: domain Description: VOC Location: 59747-60089 bp Feature: domain Description: VOC Location: 59747-60089 bp Feature: gene Location: 60113-61162 bp Feature: domain Description: Zn_ADH7 Location: 60137-61148 bp Feature: domain Description: Zn_ADH7 Location: 601 37-61 1 48 bp Feature: gene Location: 61378-62772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61696-62320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 696-62320 bp Feature: domain Description: GIIM Note: maturase Location: 62377-62593 bp Feature: domain Description: GIIM Note: maturase Location: 62377-62593 bp Feature: gene Location: 62844-63002 bp Feature: gene Location: 63407-64408 bp Feature: domain Description: NagC Location: 63524-64382 bp Feature: domain Description: NagC Location: 63524-64382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC (cl14632), Zn_ADH7 (cd08261), RVT-GII, GIIM (pfam08388), NagC (COG1940)

Seq: JAAIPU010000001.1 Blautia faecis strain MSK.14.13 NODE_1_length_288297_cov_210.128, whole genome shotgun sequence (288297 bp)
Overview 1 RT 1: 240806-243336 bp Neighborhood of RT #1 [240806, 243425] group_II_RT_mat RVT-GII GIIM DUF3801 Feature: gene Location: 240806-241015 bp Feature: gene Location: 241107-241352 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 241227-241335 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 412 2 7-2 41335 bp Feature: gene Location: 241352-242395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241397-242030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 41397-2 42 030 bp Feature: domain Description: GIIM Note: maturase Location: 242111-242327 bp Feature: domain Description: GIIM Note: maturase Location: 2 42 111-2 42 32 7 bp Feature: gene Location: 242515-242661 bp Feature: gene Location: 242907-243425 bp Feature: domain Description: DUF3801 Location: 243006-243336 bp Feature: domain Description: DUF3801 Location: 2 43006-2 43336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), DUF3801 (pfam12687)

Seq: JAAIPU010000023.1 Blautia faecis strain MSK.14.13 NODE_23_length_61289_cov_128.834, whole genome shotgun sequence (61289 bp)
Overview 1 RT 1: 14242-20220 bp Neighborhood of RT #1 [14242, 20220] FepC FepD RVT-GII GIIM COG3547 Feature: gene Location: 14242-15237 bp Feature: domain Description: FepC Location: 14260-14968 bp Feature: domain Description: FepC Location: 14260-14968 bp Feature: gene Location: 15239-16309 bp Feature: domain Description: FepD Location: 15320-16301 bp Feature: domain Description: FepD Location: 153 20-163 01 bp Feature: gene Location: 16637-18031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16991-17678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16991-17678 bp Feature: domain Description: GIIM Note: maturase Location: 17744-17963 bp Feature: domain Description: GIIM Note: maturase Location: 17744-17963 bp Feature: gene Location: 18651-19943 bp Feature: domain Description: COG3547 Location: 18708-19743 bp Feature: domain Description: COG3 547 Location: 18708-19743 bp Feature: gene Location: 20044-20220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FepC (COG1120), FepD (COG0609), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JAAIPU010000003.1 Blautia faecis strain MSK.14.13 NODE_3_length_255001_cov_192.497, whole genome shotgun sequence (255001 bp)
Overview 1 RT 1: 31004-34548 bp Neighborhood of RT #1 [31004, 34548] Phage_XkdX RVT-DGRs Avd_like Feature: gene Location: 31004-31156 bp Feature: gene Location: 31216-31371 bp Feature: domain Description: Phage_XkdX Location: 31249-31354 bp Feature: domain Description: Phage_XkdX Location: 3124 9-31354 bp Feature: gene Location: 31488-32669 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31791-32394 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31791-32394 bp Feature: gene Location: 32872-33291 bp Feature: domain Description: Avd_like Location: 32923-33250 bp Feature: domain Description: Avd_like Location: 32923-33250 bp Feature: gene Location: 33337-34548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, Avd_like (cd16376)

Seq: JAAIPU010000094.1 Blautia faecis strain MSK.14.13 NODE_94_length_2631_cov_144.101, whole genome shotgun sequence (2631 bp)
Overview 1 RT 1: 637-2131 bp Neighborhood of RT #1 [637, 2469] RVT-GII Intron_maturas2 Feature: gene Location: 637-2469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-175 0 bp Feature: domain Description: Intron_maturas2 Location: 1828-2131 bp Feature: domain Description: Intron_maturas2 Location: 1828-2131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: JAAIPU010000097.1 Blautia faecis strain MSK.14.13 NODE_97_length_2184_cov_475.947, whole genome shotgun sequence (2184 bp)
Overview 1 RT 1: 585-1857 bp Neighborhood of RT #1 [585, 2060] RVT_N RVT-GII GIIM Feature: gene Location: 585-2060 bp Feature: RT Description: RVT_N Location: 636-873 bp Feature: RT Description: RVT_N Location: 6 36 -873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1572 bp Feature: domain Description: GIIM Note: maturase Location: 1623-1857 bp Feature: domain Description: GIIM Note: maturase Location: 16 23-1857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)