myRT

myRT report for GCA_013302465.1_ASM1330246v1

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Seq: JAAIPY010000028.1 Anaerostipes hadrus strain MSK.6.11 NODE_28_length_30617_cov_197.96, whole genome shotgun sequence (30617 bp)
Overview 1 RT 1: 19360-25591 bp Neighborhood of RT #1 [19360, 25689] HEPN_Apea FtsK RVT-GII GIIM HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 19360-20916 bp Feature: domain Description: HEPN_Apea Location: 20464-20746 bp Feature: domain Description: HEPN_Apea Location: 20464-20746 bp Feature: gene Location: 20986-22389 bp Feature: domain Description: FtsK Location: 21646-22246 bp Feature: domain Description: FtsK Location: 21 646-22246 bp Feature: gene Location: 22546-23940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22864-23488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22864-23488 bp Feature: domain Description: GIIM Note: maturase Location: 23545-23761 bp Feature: domain Description: GIIM Note: maturase Location: 23545-23761 bp Feature: gene Location: 24562-24924 bp Feature: domain Description: HTH_XRE Location: 24568-24667 bp Feature: domain Description: HTH_XRE Location: 24568-24667 bp Feature: domain Description: Rol_Rep_N Location: 24688-24919 bp Feature: domain Description: Rol_Rep_N Location: 24688-2491 9 bp Feature: gene Location: 24949-25689 bp Feature: domain Description: Rep_trans Location: 24976-25591 bp Feature: domain Description: Rep_trans Location: 24976-25591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_Apea (pfam18739), FtsK (COG1674), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: JAAIPY010000004.1 Anaerostipes hadrus strain MSK.6.11 NODE_4_length_212970_cov_234.75, whole genome shotgun sequence (212970 bp)
Overview 1 RT 1: 171079-176634 bp Neighborhood of RT #1 [171079, 176834] AAA_21 AAA_21 RVT-GII GIIM SpoIIID MATE_yoeA_like Feature: gene Location: 171079-171615 bp Feature: gene Location: 171615-173000 bp Feature: domain Description: AAA_21 Location: 171747-172098 bp Feature: domain Description: AAA_2 1 Location: 171747-172 098 bp Feature: domain Description: AAA_21 Location: 172605-172800 bp Feature: domain Description: AAA_2 1 Location: 172 605-172 800 bp Feature: gene Location: 173188-174600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173539-174160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173539-174160 bp Feature: domain Description: GIIM Note: maturase Location: 174214-174439 bp Feature: domain Description: GIIM Note: maturase Location: 1742 14-174439 bp Feature: gene Location: 175047-175502 bp Feature: domain Description: SpoIIID Location: 175257-175497 bp Feature: domain Description: SpoIIID Location: 1752 57-175497 bp Feature: gene Location: 175524-176834 bp Feature: domain Description: MATE_yoeA_like Location: 175560-176634 bp Feature: domain Description: MATE_yoeA_like Location: 175560-176634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-GII, GIIM (pfam08388), SpoIIID (pfam12116), MATE_yoeA_like (cd13138)

Seq: JAAIPY010000007.1 Anaerostipes hadrus strain MSK.6.11 NODE_7_length_139361_cov_315.805, whole genome shotgun sequence (139361 bp)
Overview 1 RT 1: 121894-125875 bp Neighborhood of RT #1 [121894, 125907] DUF2007 RVT-GII GIIM FGGY_D-XK_EcXK-like Feature: gene Location: 121894-122031 bp Feature: gene Location: 122061-122420 bp Feature: domain Description: DUF2007 Location: 122079-122277 bp Feature: domain Description: DUF2007 Location: 122079-122277 bp Feature: gene Location: 122501-123895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122819-123443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122819-123 443 bp Feature: domain Description: GIIM Note: maturase Location: 123500-123722 bp Feature: domain Description: GIIM Note: maturase Location: 123 500-123 722 bp Feature: gene Location: 124005-124358 bp Feature: gene Location: 124438-125907 bp Feature: domain Description: FGGY_D-XK_EcXK-like Location: 124447-125875 bp Feature: domain Description: FGGY_D-XK_EcXK-like Location: 124447-125875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2007 (pfam09413), RVT-GII, GIIM (pfam08388), FGGY_D-XK_EcXK-like (cd07808)