myRT

myRT report for GCA_013303035.1_ASM1330303v1

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Seq: JABTVM010000003.1 Tatlockia micdadei strain 2014LM LP_FDMS190675741-1a_1.clean_(paired)_contig_1, whole genome shotgun sequence (308307 bp)
Overview 1 RT 1: 219671-225124 bp Neighborhood of RT #1 [219671, 225124] Phage_int_SAM_2 RVT-Retrons Trypsin_2 conj_TOL_TraD Feature: gene Location: 219671-220477 bp Feature: domain Description: Phage_int_SAM_2 Location: 219722-219929 bp Feature: domain Description: Phage_int_SAM_2 Location: 21 9722-21 9929 bp Feature: gene Location: 220501-220728 bp Feature: gene Location: 221057-222682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 221186-221789 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 221 1 86-221 789 bp Feature: domain Description: Trypsin_2 Location: 222173-222593 bp Feature: domain Description: Trypsin_2 Location: 2221 73-222593 bp Feature: gene Location: 222864-224798 bp Feature: domain Description: conj_TOL_TraD Location: 222882-224790 bp Feature: domain Description: conj_TOL_TraD Location: 222882-224790 bp Feature: gene Location: 224795-225124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), RVT-Retrons, Trypsin_2 (pfam13365), conj_TOL_TraD (TIGR03754)

Seq: JABTVM010000025.1 Tatlockia micdadei strain 2014LM LP_FDMS190675741-1a_1.clean_(paired)_contig_25, whole genome shotgun sequence (12571 bp)
Overview 1 RT 1: 10573-12265 bp Neighborhood of RT #1 [10573, 12265] Phage_integrase RVT-UG18 Feature: gene Location: 10573-10734 bp Feature: gene Location: 11078-11599 bp Feature: domain Description: Phage_integrase Location: 11147-11459 bp Feature: domain Description: Phage_integrase Location: 11147-11459 bp Feature: gene Location: 11553-11792 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 11565-11769 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 11565-11769 bp Feature: gene Location: 11867-12265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG18