myRT

myRT report for GCA_013303295.1_ASM1330329v1

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Seq: JAAIRB010000121.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_122_length_924_cov_144.259, whole genome shotgun sequence (924 bp)
Overview 1 RT 1: 3-876 bp Neighborhood of RT #1 [3, 923] RVT-GII Feature: gene Location: 3-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 50-876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIRB010000016.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_16_length_83305_cov_293.923, whole genome shotgun sequence (83305 bp)
Overview 1 RT 1: 26737-30041 bp Neighborhood of RT #1 [26737, 31372] RVT-DGRs 7tmA_mAChR_GAR-2-like Feature: gene Location: 26737-26928 bp Feature: gene Location: 26921-27067 bp Feature: gene Location: 27347-28618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27647-28307 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 7647-2 8307 bp Feature: gene Location: 28727-28930 bp Feature: gene Location: 29129-31372 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 29633-30041 bp Feature: domain Description: 7tmA_mAChR_GAR-2 -like Location: 2 9633-30041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, 7tmA_mAChR_GAR-2-like (cd15302)

Seq: JAAIRB010000001.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_1_length_193913_cov_186.781, whole genome shotgun sequence (193913 bp)
Overview 1 RT 1: 66270-70490 bp Neighborhood of RT #1 [66270, 70490] RVT-DGRs Feature: gene Location: 66270-66410 bp Feature: gene Location: 66518-67216 bp Feature: gene Location: 67176-68432 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67467-68058 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67467-68058 bp Feature: gene Location: 68527-68736 bp Feature: gene Location: 68814-70490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRB010000020.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_20_length_70972_cov_179.975, whole genome shotgun sequence (70972 bp)
Overview 1 RT 1: 19422-25451 bp Neighborhood of RT #1 [19422, 25451] WrbA LanM-like RVT-GII GIIM Feature: gene Location: 19422-20132 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: domain Description: WrbA Location: 194 25-19872 bp Feature: gene Location: 20148-22892 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: domain Description: LanM-like Location: 20334 -22884 bp Feature: gene Location: 23186-24037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: domain Description: GIIM Note: maturase Location: 23654-23876 bp Feature: domain Description: GIIM Note: maturase Location: 23654 -23876 bp Feature: gene Location: 24630-24944 bp Feature: gene Location: 25308-25451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), LanM-like (cd04792), RVT-GII, GIIM (pfam08388)

Seq: JAAIRB010000003.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_3_length_190925_cov_250.443, whole genome shotgun sequence (190925 bp)
Overview 1 RT 1: 56785-60185 bp Neighborhood of RT #1 [56785, 60670] RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 56785-57297 bp Feature: gene Location: 57460-57678 bp Feature: gene Location: 57668-58777 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57875-58541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 7875 -5 85 41 bp Feature: gene Location: 59103-59483 bp Feature: domain Description: Avd_like Location: 59163-59472 bp Feature: domain Description: Avd_like Location: 5 9163-5 9472 bp Feature: gene Location: 59597-60670 bp Feature: domain Description: FGE-sulfatase Location: 59846-60185 bp Feature: domain Description: FGE-sulfatase Location: 5 9846-60185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)

Seq: JAAIRB010000045.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_45_length_23192_cov_269.254, whole genome shotgun sequence (23192 bp)
Overview 1 RT 1: 6479-10109 bp Neighborhood of RT #1 [6479, 10315] Phage_XkdX RVT-DGRs SH3_3 Feature: gene Location: 6479-6631 bp Feature: domain Description: Phage_XkdX Location: 6500-6611 bp Feature: domain Description: Phage_XkdX Location: 6 500-6 6 11 bp Feature: gene Location: 6633-6959 bp Feature: gene Location: 6868-8253 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7081-7825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7081-7825 bp Feature: gene Location: 8618-9913 bp Feature: gene Location: 9917-10315 bp Feature: domain Description: SH3_3 Location: 9956-10109 bp Feature: domain Description: SH3_3 Location: 9956 -10109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, SH3_3 (pfam08239)

Seq: JAAIRB010000009.1 [Ruminococcus] gnavus strain MSK.23.81 NODE_9_length_106095_cov_324.148, whole genome shotgun sequence (106095 bp)
Overview 1 RT 1: 39486-42130 bp Neighborhood of RT #1 [39486, 42130] Avd_like RVT-DGRs Phytochelatin_C Feature: gene Location: 39486-39830 bp Feature: domain Description: Avd_like Location: 39510-39822 bp Feature: domain Description: Avd_like Location: 39510-39822 bp Feature: gene Location: 39869-40234 bp Feature: gene Location: 40257-41402 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40470-41136 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4047 0-41136 bp Feature: gene Location: 41381-41737 bp Feature: domain Description: Phytochelatin_C Location: 41396-41576 bp Feature: domain Description: Phytochelatin_C Location: 41396-4157 6 bp Feature: gene Location: 41750-42130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phytochelatin_C (pfam09328)