myRT

myRT report for GCA_013303385.1_ASM1330338v1

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Seq: JAAIRE010000099.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_100_length_2427_cov_584.69, whole genome shotgun sequence (2427 bp)
Overview 1 RT 1: 3-2424 bp Neighborhood of RT #1 [3, 2424] RVT-DGRs Feature: gene Location: 3-785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 216-783 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 6-783 bp Feature: gene Location: 892-1056 bp Feature: gene Location: 1150-2424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRE010000010.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_10_length_107330_cov_400.844, whole genome shotgun sequence (107330 bp)
Overview 1 RT 1: 40103-42747 bp Neighborhood of RT #1 [40103, 42747] Avd_like RVT-DGRs Phytochelatin_C Feature: gene Location: 40103-40447 bp Feature: domain Description: Avd_like Location: 40127-40439 bp Feature: domain Description: Avd_like Location: 4012 7-40439 bp Feature: gene Location: 40486-40851 bp Feature: gene Location: 40874-42019 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41087-41753 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41087-41753 bp Feature: gene Location: 41998-42354 bp Feature: domain Description: Phytochelatin_C Location: 42013-42193 bp Feature: domain Description: Phytochelatin_C Location: 42 013-42 193 bp Feature: gene Location: 42367-42747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phytochelatin_C (pfam09328)

Seq: JAAIRE010000135.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_138_length_924_cov_190.699, whole genome shotgun sequence (924 bp)
Overview 1 RT 1: 3-876 bp Neighborhood of RT #1 [3, 923] RVT-GII Feature: gene Location: 3-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIRE010000016.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_16_length_83305_cov_341.928, whole genome shotgun sequence (83305 bp)
Overview 1 RT 1: 26737-30041 bp Neighborhood of RT #1 [26737, 31372] RVT-DGRs 7tmA_mAChR_GAR-2-like Feature: gene Location: 26737-26928 bp Feature: gene Location: 26921-27067 bp Feature: gene Location: 27347-28618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27647-28307 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2764 7-28307 bp Feature: gene Location: 28727-28930 bp Feature: gene Location: 29129-31372 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 29633-30041 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 29633-3004 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, 7tmA_mAChR_GAR-2-like (cd15302)

Seq: JAAIRE010000019.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_19_length_70972_cov_277.762, whole genome shotgun sequence (70972 bp)
Overview 1 RT 1: 19422-25451 bp Neighborhood of RT #1 [19422, 25451] WrbA LanM-like RVT-GII GIIM Feature: gene Location: 19422-20132 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: domain Description: WrbA Location: 19425 -19872 bp Feature: gene Location: 20148-22892 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: gene Location: 23186-24037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-235 97 bp Feature: domain Description: GIIM Note: maturase Location: 23654-23876 bp Feature: domain Description: GIIM Note: maturase Location: 2365 4-23876 bp Feature: gene Location: 24630-24944 bp Feature: gene Location: 25308-25451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), LanM-like (cd04792), RVT-GII, GIIM (pfam08388)

Seq: JAAIRE010000001.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_1_length_193913_cov_215.584, whole genome shotgun sequence (193913 bp)
Overview 1 RT 1: 123424-127748 bp Neighborhood of RT #1 [123424, 127748] RVT-DGRs Feature: gene Location: 123424-125100 bp Feature: gene Location: 125178-125387 bp Feature: gene Location: 125482-126738 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125773-126364 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125773-126 36 4 bp Feature: gene Location: 126698-127396 bp Feature: gene Location: 127545-127748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRE010000003.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_3_length_191090_cov_320.497, whole genome shotgun sequence (191090 bp)
Overview 1 RT 1: 56950-60350 bp Neighborhood of RT #1 [56950, 60835] RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 56950-57462 bp Feature: gene Location: 57625-57843 bp Feature: gene Location: 57833-58942 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58040-58706 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58040-587 06 bp Feature: gene Location: 59268-59648 bp Feature: domain Description: Avd_like Location: 59328-59637 bp Feature: domain Description: Avd_like Location: 59328-59637 bp Feature: gene Location: 59762-60835 bp Feature: domain Description: FGE-sulfatase Location: 60011-60350 bp Feature: domain Description: FGE-sulfatase Location: 60011-60350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)

Seq: JAAIRE010000045.1 [Ruminococcus] gnavus strain MSK.23.62 NODE_45_length_24449_cov_200.643, whole genome shotgun sequence (24449 bp)
Overview 1 RT 1: 12416-15497 bp Neighborhood of RT #1 [12416, 15499] RVT-GII HTH_26 Feature: gene Location: 12416-12940 bp Feature: gene Location: 13100-13345 bp Feature: gene Location: 13435-14730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13690-14380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13690-1438 0 bp Feature: gene Location: 14862-15170 bp Feature: gene Location: 15284-15499 bp Feature: domain Description: HTH_26 Location: 15311-15497 bp Feature: domain Description: HTH_26 Location: 15311-15497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_26 (pfam13443)