myRT

myRT report for GCA_013303475.1_ASM1330347v1

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Seq: JAAIRK010000099.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_100_length_2427_cov_415.486, whole genome shotgun sequence (2427 bp)
Overview 1 RT 1: 3-2424 bp Neighborhood of RT #1 [3, 2424] RVT-DGRs Feature: gene Location: 3-785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 216-783 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 6-783 bp Feature: gene Location: 892-1056 bp Feature: gene Location: 1150-2424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRK010000135.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_138_length_924_cov_118.776, whole genome shotgun sequence (924 bp)
Overview 1 RT 1: 2-875 bp Neighborhood of RT #1 [2, 922] RVT-GII Feature: gene Location: 2-922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIRK010000018.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_18_length_70972_cov_208.93, whole genome shotgun sequence (70972 bp)
Overview 1 RT 1: 19422-25451 bp Neighborhood of RT #1 [19422, 25451] WrbA LanM-like RVT-GII GIIM Feature: gene Location: 19422-20132 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: gene Location: 20148-22892 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: domain Description: LanM-like Location: 203 3 4-22884 bp Feature: gene Location: 23186-24037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 189-23 597 bp Feature: domain Description: GIIM Note: maturase Location: 23654-23876 bp Feature: domain Description: GIIM Note: maturase Location: 23 654-23 876 bp Feature: gene Location: 24630-24944 bp Feature: gene Location: 25308-25451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), LanM-like (cd04792), RVT-GII, GIIM (pfam08388)

Seq: JAAIRK010000001.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_1_length_193913_cov_149.646, whole genome shotgun sequence (193913 bp)
Overview 1 RT 1: 123424-127748 bp Neighborhood of RT #1 [123424, 127748] RVT-DGRs Feature: gene Location: 123424-125100 bp Feature: gene Location: 125178-125387 bp Feature: gene Location: 125482-126738 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125773-126364 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125773-126364 bp Feature: gene Location: 126698-127396 bp Feature: gene Location: 127545-127748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRK010000022.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_22_length_56762_cov_303.13, whole genome shotgun sequence (56762 bp)
Overview 1 RT 1: 51934-56557 bp Neighborhood of RT #1 [51934, 56557] 7tmA_mAChR_GAR-2-like RVT-DGRs Feature: gene Location: 51934-54177 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 52438-52846 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 5 2438-5 2846 bp Feature: gene Location: 54376-54579 bp Feature: gene Location: 54688-55959 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54988-55648 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 4988-5 5 648 bp Feature: gene Location: 56239-56385 bp Feature: gene Location: 56378-56557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7tmA_mAChR_GAR-2-like (cd15302), RVT-DGRs

Seq: JAAIRK010000003.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_3_length_191090_cov_228.037, whole genome shotgun sequence (191090 bp)
Overview 1 RT 1: 56950-60350 bp Neighborhood of RT #1 [56950, 60835] RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 56950-57462 bp Feature: gene Location: 57625-57843 bp Feature: gene Location: 57833-58942 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58040-58706 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58040-58706 bp Feature: gene Location: 59268-59648 bp Feature: domain Description: Avd_like Location: 59328-59637 bp Feature: domain Description: Avd_like Location: 59328-596 37 bp Feature: gene Location: 59762-60835 bp Feature: domain Description: FGE-sulfatase Location: 60011-60350 bp Feature: domain Description: FGE-sulfatase Location: 6 0011-6 0350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)

Seq: JAAIRK010000009.1 [Ruminococcus] gnavus strain MSK.23.43 NODE_9_length_106094_cov_301.476, whole genome shotgun sequence (106094 bp)
Overview 1 RT 1: 39486-42130 bp Neighborhood of RT #1 [39486, 42130] Avd_like RVT-DGRs Phytochelatin_C Feature: gene Location: 39486-39830 bp Feature: domain Description: Avd_like Location: 39510-39822 bp Feature: domain Description: Avd_like Location: 39510-39822 bp Feature: gene Location: 39869-40234 bp Feature: gene Location: 40257-41402 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40470-41136 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4047 0-41136 bp Feature: gene Location: 41381-41737 bp Feature: domain Description: Phytochelatin_C Location: 41396-41576 bp Feature: domain Description: Phytochelatin_C Location: 41396-4157 6 bp Feature: gene Location: 41750-42130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phytochelatin_C (pfam09328)