myRT

myRT report for GCA_013303495.1_ASM1330349v1

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Seq: JAAIRJ010000021.1 [Ruminococcus] gnavus strain MSK.23.46 NODE_21_length_63036_cov_322.143, whole genome shotgun sequence (63036 bp)
Overview 1 RT 1: 49542-52956 bp Neighborhood of RT #1 [49542, 52976] RVT-DGRs Phage_XkdX Feature: gene Location: 49542-50837 bp Feature: gene Location: 50931-51095 bp Feature: gene Location: 51202-52587 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51415-52159 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51 41 5-521 59 bp Feature: gene Location: 52496-52822 bp Feature: gene Location: 52824-52976 bp Feature: domain Description: Phage_XkdX Location: 52845-52956 bp Feature: domain Description: Phage_XkdX Location: 52845-52956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: JAAIRJ010000055.1 [Ruminococcus] gnavus strain MSK.23.46 NODE_55_length_13206_cov_89.7529, whole genome shotgun sequence (13206 bp)
Overview 1 RT 1: 5269-12570 bp Neighborhood of RT #1 [5269, 12578] MelB ebgA RVT-GII GIIM DUF4300 PRK10572 Feature: gene Location: 5269-6648 bp Feature: domain Description: MelB Location: 5278-6622 bp Feature: domain Description: MelB Location: 52 78-662 2 bp Feature: gene Location: 6655-9720 bp Feature: domain Description: ebgA Location: 6673-9706 bp Feature: domain Description: ebgA Location: 6673-9706 bp Feature: gene Location: 9941-10531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9947-10046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9947-10046 bp Feature: domain Description: GIIM Note: maturase Location: 10100-10316 bp Feature: domain Description: GIIM Note: maturase Location: 10100-10316 bp Feature: gene Location: 10720-11565 bp Feature: domain Description: DUF4300 Location: 10816-11560 bp Feature: domain Description: DUF4300 Location: 10816-11560 bp Feature: gene Location: 11727-12578 bp Feature: domain Description: PRK10572 Location: 11853-12570 bp Feature: domain Description: PRK10572 Location: 11853-12 570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4300 (pfam14133), MelB (COG2211), ebgA (PRK10340), RVT-GII, GIIM (pfam08388)

Seq: JAAIRJ010000093.1 [Ruminococcus] gnavus strain MSK.23.46 NODE_94_length_2745_cov_510.023, whole genome shotgun sequence (2745 bp)
Overview 1 RT 1: 2-1778 bp Neighborhood of RT #1 [2, 2614] RVT-GII Feature: gene Location: 2-163 bp Feature: gene Location: 704-2614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 4-1778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIRJ010000095.1 [Ruminococcus] gnavus strain MSK.23.46 NODE_96_length_2682_cov_457.923, whole genome shotgun sequence (2682 bp)
Overview 1 RT 1: 745-1744 bp Neighborhood of RT #1 [745, 2571] RVT-GII Feature: gene Location: 745-2571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 5-174 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII