myRT

myRT report for GCA_013303535.1_ASM1330353v1

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Seq: JAAIRL010000010.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_10_length_106095_cov_391.328, whole genome shotgun sequence (106095 bp)
Overview 1 RT 1: 39486-42130 bp Neighborhood of RT #1 [39486, 42130] Avd_like RVT-DGRs Phytochelatin_C Feature: gene Location: 39486-39830 bp Feature: domain Description: Avd_like Location: 39510-39822 bp Feature: domain Description: Avd_like Location: 3951 0-39822 bp Feature: gene Location: 39869-40234 bp Feature: gene Location: 40257-41402 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40470-41136 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40470-41 1 36 bp Feature: gene Location: 41381-41737 bp Feature: domain Description: Phytochelatin_C Location: 41396-41576 bp Feature: domain Description: Phytochelatin_C Location: 41 396-41 576 bp Feature: gene Location: 41750-42130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phytochelatin_C (pfam09328)

Seq: JAAIRL010000120.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_131_length_924_cov_185.547, whole genome shotgun sequence (924 bp)
Overview 1 RT 1: 3-876 bp Neighborhood of RT #1 [3, 923] RVT-GII Feature: gene Location: 3-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIRL010000013.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_13_length_94748_cov_256.137, whole genome shotgun sequence (94748 bp)
Overview 1 RT 1: 84836-88250 bp Neighborhood of RT #1 [84836, 88270] RVT-DGRs Phage_XkdX Feature: gene Location: 84836-86131 bp Feature: gene Location: 86225-86389 bp Feature: gene Location: 86496-87881 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86709-87453 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86709-87453 bp Feature: gene Location: 87790-88116 bp Feature: gene Location: 88118-88270 bp Feature: domain Description: Phage_XkdX Location: 88139-88250 bp Feature: domain Description: Phage_XkdX Location: 8813 9-88250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: JAAIRL010000018.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_18_length_83305_cov_312.824, whole genome shotgun sequence (83305 bp)
Overview 1 RT 1: 51934-56569 bp Neighborhood of RT #1 [51934, 56569] 7tmA_mAChR_GAR-2-like RVT-DGRs Feature: gene Location: 51934-54177 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 52438-52846 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 524 38-5284 6 bp Feature: gene Location: 54376-54579 bp Feature: gene Location: 54688-55959 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54988-55648 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54 988-5564 8 bp Feature: gene Location: 56239-56385 bp Feature: gene Location: 56378-56569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7tmA_mAChR_GAR-2-like (cd15302), RVT-DGRs

Seq: JAAIRL010000001.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_1_length_193910_cov_202.237, whole genome shotgun sequence (193910 bp)
Overview 1 RT 1: 123421-127745 bp Neighborhood of RT #1 [123421, 127745] RVT-DGRs Feature: gene Location: 123421-125097 bp Feature: gene Location: 125175-125384 bp Feature: gene Location: 125479-126735 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125770-126361 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125 770-126361 bp Feature: gene Location: 126695-127393 bp Feature: gene Location: 127542-127745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRL010000021.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_21_length_70972_cov_255.894, whole genome shotgun sequence (70972 bp)
Overview 1 RT 1: 19422-25451 bp Neighborhood of RT #1 [19422, 25451] WrbA LanM-like RVT-GII GIIM Feature: gene Location: 19422-20132 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: gene Location: 20148-22892 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: gene Location: 23186-24037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: domain Description: GIIM Note: maturase Location: 23654-23876 bp Feature: domain Description: GIIM Note: maturase Location: 236 54-23876 bp Feature: gene Location: 24630-24944 bp Feature: gene Location: 25308-25451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), LanM-like (cd04792), RVT-GII, GIIM (pfam08388)

Seq: JAAIRL010000002.1 [Ruminococcus] gnavus strain MSK.23.41 NODE_2_length_191027_cov_302.047, whole genome shotgun sequence (191027 bp)
Overview 1 RT 1: 56887-60287 bp Neighborhood of RT #1 [56887, 60772] RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 56887-57399 bp Feature: gene Location: 57562-57780 bp Feature: gene Location: 57770-58879 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57977-58643 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57 97 7 -58643 bp Feature: gene Location: 59205-59585 bp Feature: domain Description: Avd_like Location: 59265-59574 bp Feature: domain Description: Avd_like Location: 59265-5957 4 bp Feature: gene Location: 59699-60772 bp Feature: domain Description: FGE-sulfatase Location: 59948-60287 bp Feature: domain Description: FGE-sulfatase Location: 59948-60287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)