myRT

myRT report for GCA_013303585.1_ASM1330358v1

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Seq: JAAIRN010000010.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_10_length_106890_cov_328.259, whole genome shotgun sequence (106890 bp)
Overview 1 RT 1: 39664-42308 bp Neighborhood of RT #1 [39664, 42308] Avd_like RVT-DGRs Phytochelatin_C Feature: gene Location: 39664-40008 bp Feature: domain Description: Avd_like Location: 39688-40000 bp Feature: domain Description: Avd_like Location: 39688-40000 bp Feature: gene Location: 40047-40412 bp Feature: gene Location: 40435-41580 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40648-41314 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40648-41 31 4 bp Feature: gene Location: 41559-41915 bp Feature: domain Description: Phytochelatin_C Location: 41574-41754 bp Feature: domain Description: Phytochelatin_C Location: 41 574-41 754 bp Feature: gene Location: 41928-42308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phytochelatin_C (pfam09328)

Seq: JAAIRN010000122.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_123_length_924_cov_154.379, whole genome shotgun sequence (924 bp)
Overview 1 RT 1: 3-876 bp Neighborhood of RT #1 [3, 923] RVT-GII Feature: gene Location: 3-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150-876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIRN010000013.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_13_length_94748_cov_206.548, whole genome shotgun sequence (94748 bp)
Overview 1 RT 1: 6479-10247 bp Neighborhood of RT #1 [6479, 10348] Phage_XkdX RVT-DGRs Alanine_zipper Feature: gene Location: 6479-6631 bp Feature: domain Description: Phage_XkdX Location: 6500-6611 bp Feature: domain Description: Phage_XkdX Location: 6500-6611 bp Feature: gene Location: 6633-6959 bp Feature: gene Location: 6868-8253 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7081-7825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7081-7825 bp Feature: gene Location: 8618-9913 bp Feature: gene Location: 9917-10348 bp Feature: domain Description: Alanine_zipper Location: 10136-10247 bp Feature: domain Description: Alanine_zipper Location: 1013 6-10247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, Alanine_zipper (pfam11839)

Seq: JAAIRN010000018.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_18_length_83305_cov_271.377, whole genome shotgun sequence (83305 bp)
Overview 1 RT 1: 26737-30041 bp Neighborhood of RT #1 [26737, 31372] RVT-DGRs 7tmA_mAChR_GAR-2-like Feature: gene Location: 26737-26928 bp Feature: gene Location: 26921-27067 bp Feature: gene Location: 27347-28618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27647-28307 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2764 7-28307 bp Feature: gene Location: 28727-28930 bp Feature: gene Location: 29129-31372 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 29633-30041 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 29633-3004 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, 7tmA_mAChR_GAR-2-like (cd15302)

Seq: JAAIRN010000001.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_1_length_193910_cov_163.019, whole genome shotgun sequence (193910 bp)
Overview 1 RT 1: 66270-70490 bp Neighborhood of RT #1 [66270, 70490] RVT-DGRs Feature: gene Location: 66270-66410 bp Feature: gene Location: 66518-67216 bp Feature: gene Location: 67176-68432 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67467-68058 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67467-6805 8 bp Feature: gene Location: 68527-68736 bp Feature: gene Location: 68814-70490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAIRN010000021.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_21_length_70972_cov_248.283, whole genome shotgun sequence (70972 bp)
Overview 1 RT 1: 19422-25451 bp Neighborhood of RT #1 [19422, 25451] WrbA LanM-like RVT-GII GIIM Feature: gene Location: 19422-20132 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: domain Description: WrbA Location: 19425-19872 bp Feature: gene Location: 20148-22892 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: domain Description: LanM-like Location: 20334-22884 bp Feature: gene Location: 23186-24037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23189-23597 bp Feature: domain Description: GIIM Note: maturase Location: 23654-23876 bp Feature: domain Description: GIIM Note: maturase Location: 236 54-23876 bp Feature: gene Location: 24630-24944 bp Feature: gene Location: 25308-25451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), LanM-like (cd04792), RVT-GII, GIIM (pfam08388)

Seq: JAAIRN010000002.1 [Ruminococcus] gnavus strain MSK.22.24 NODE_2_length_190964_cov_261.305, whole genome shotgun sequence (190964 bp)
Overview 1 RT 1: 56824-60224 bp Neighborhood of RT #1 [56824, 60709] RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 56824-57336 bp Feature: gene Location: 57499-57717 bp Feature: gene Location: 57707-58816 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57914-58580 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57 914-58580 bp Feature: gene Location: 59142-59522 bp Feature: domain Description: Avd_like Location: 59202-59511 bp Feature: domain Description: Avd_like Location: 59202-59511 bp Feature: gene Location: 59636-60709 bp Feature: domain Description: FGE-sulfatase Location: 59885-60224 bp Feature: domain Description: FGE-sulfatase Location: 59885-60224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)