myRT

myRT report for GCA_013303775.1_ASM1330377v1

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Seq: JAAISA010000023.1 [Eubacterium] rectale strain MSK.9.13 NODE_23_length_47479_cov_333.023, whole genome shotgun sequence (47479 bp)
Overview 1 RT 1: 26135-33699 bp Neighborhood of RT #1 [26135, 33764] Maff2 VirD4 RVT-GII RVT-GII VirD4 Feature: gene Location: 26135-26350 bp Feature: domain Description: Maff2 Location: 26138-26345 bp Feature: domain Description: Maff2 Location: 261 38-26345 bp Feature: gene Location: 26479-27537 bp Feature: domain Description: VirD4 Location: 26614-27403 bp Feature: domain Description: VirD4 Location: 2661 4-27403 bp Feature: gene Location: 27684-29591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28014-28758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2801 4-28758 bp Feature: gene Location: 29614-29859 bp Feature: gene Location: 30561-32438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30882-31626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30882-31 626 bp Feature: gene Location: 32423-32746 bp Feature: gene Location: 33057-33764 bp Feature: domain Description: VirD4 Location: 33312-33699 bp Feature: domain Description: VirD4 Location: 3331 2-33699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), VirD4 (COG3505), RVT-GII

Seq: JAAISA010000005.1 [Eubacterium] rectale strain MSK.9.13 NODE_5_length_184147_cov_290.399, whole genome shotgun sequence (184147 bp)
Overview 1 RT 1: 84934-88461 bp Neighborhood of RT #1 [84934, 88550] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 Feature: gene Location: 84934-86076 bp Feature: domain Description: PHA00653 Location: 85057-86074 bp Feature: domain Description: PHA00653 Location: 85057-86074 bp Feature: gene Location: 86117-86473 bp Feature: domain Description: Avd_like Location: 86147-86453 bp Feature: domain Description: Avd_like Location: 86147-86453 bp Feature: gene Location: 86800-87861 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 87037-87658 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 87037-87658 bp Feature: gene Location: 87886-88065 bp Feature: gene Location: 88062-88550 bp Feature: domain Description: Phage_holin_4_1 Location: 88101-88461 bp Feature: domain Description: Phage_holin_4_1 Location: 88101-88461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: JAAISA010000009.1 [Eubacterium] rectale strain MSK.9.13 NODE_9_length_112061_cov_366.001, whole genome shotgun sequence (112061 bp)
Overview 1 RT 1: 55798-58742 bp Neighborhood of RT #1 [55798, 58742] Avd_like RVT-DGRs Feature: gene Location: 55798-56244 bp Feature: domain Description: Avd_like Location: 55885-56203 bp Feature: domain Description: Avd_like Location: 55885-56203 bp Feature: gene Location: 56314-56529 bp Feature: gene Location: 56686-57903 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56896-57559 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56896-57559 bp Feature: gene Location: 57881-58336 bp Feature: gene Location: 58359-58742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs