myRT

myRT report for GCA_013303805.1_ASM1330380v1

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Seq: JAAIRY010000011.1 [Ruminococcus] gnavus strain MSK.11.9 NODE_11_length_93036_cov_392.694, whole genome shotgun sequence (93036 bp)
Overview 1 RT 1: 32216-36639 bp Neighborhood of RT #1 [32216, 36815] HTH_17 HTH_17 HTH_17 HTH_17 HTH_17 RVT-GII GIIM VOC_like Methyltransf_11 Feature: gene Location: 32216-33205 bp Feature: domain Description: HTH_17 Location: 32336-32480 bp Feature: domain Description: HTH_1 7 Location: 32336-32480 bp Feature: domain Description: HTH_17 Location: 32543-32687 bp Feature: domain Description: HTH_1 7 Location: 32543-32687 bp Feature: domain Description: HTH_17 Location: 32750-32903 bp Feature: domain Description: HTH_1 7 Location: 32750-32903 bp Feature: domain Description: HTH_17 Location: 33035-33182 bp Feature: domain Description: HTH_1 7 Location: 33035-331 82 bp Feature: gene Location: 33325-33501 bp Feature: domain Description: HTH_17 Location: 33346-33487 bp Feature: domain Description: HTH_1 7 Location: 33346-33487 bp Feature: gene Location: 33757-35151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34075-34699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34075-34699 bp Feature: domain Description: GIIM Note: maturase Location: 34756-34966 bp Feature: domain Description: GIIM Note: maturase Location: 34756-34966 bp Feature: gene Location: 35705-36157 bp Feature: domain Description: VOC_like Location: 35714-36152 bp Feature: domain Description: VOC_like Location: 3571 4-361 52 bp Feature: gene Location: 36204-36815 bp Feature: domain Description: Methyltransf_11 Location: 36342-36639 bp Feature: domain Description: Methyltransf_1 1 Location: 36342-36639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), VOC_like (cd16355), Methyltransf_11 (pfam08241)

Seq: JAAIRY010000021.1 [Ruminococcus] gnavus strain MSK.11.9 NODE_21_length_57306_cov_235.923, whole genome shotgun sequence (57306 bp)
Overview 1 RT 1: 48492-57024 bp Neighborhood of RT #1 [48492, 57125] AraC RVT-GII GIIM Phage_int_SAM_3 INT_ICEBs1_C_like Rol_Rep_N Rep_trans RVT-GII Feature: gene Location: 48492-49658 bp Feature: domain Description: AraC Location: 49326-49644 bp Feature: domain Description: AraC Location: 4932 6-49644 bp Feature: gene Location: 49660-49827 bp Feature: gene Location: 49934-50650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49940-50300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49940-50300 bp Feature: domain Description: GIIM Note: maturase Location: 50360-50579 bp Feature: domain Description: GIIM Note: maturase Location: 50360-50579 bp Feature: gene Location: 50818-52023 bp Feature: domain Description: Phage_int_SAM_3 Location: 51016-51184 bp Feature: domain Description: Phage_int_SAM_3 Location: 51016-51184 bp Feature: domain Description: INT_ICEBs1_C_like Location: 51352-51958 bp Feature: domain Description: INT_ICEBs1_C_like Location: 51352 -51958 bp Feature: gene Location: 52269-53405 bp Feature: domain Description: Rol_Rep_N Location: 52353-52632 bp Feature: domain Description: Rol_Rep_N Location: 52 353-52 632 bp Feature: domain Description: Rep_trans Location: 52653-53262 bp Feature: domain Description: Rep_trans Location: 52 653-532 62 bp Feature: gene Location: 55146-55514 bp Feature: gene Location: 55507-56640 bp Feature: gene Location: 56808-57125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56814-57024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56814-5702 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), RVT-GII, GIIM (pfam08388), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)