myRT

myRT report for GCA_013304025.1_ASM1330402v1

Download annotations/find similar RTs

Seq: JAAISJ010000014.1 [Eubacterium] rectale strain MSK.13.48 NODE_14_length_67603_cov_353.528, whole genome shotgun sequence (67603 bp)
Overview 1 RT 1: 18738-23044 bp Neighborhood of RT #1 [18738, 23130] RVT-DGRs DUF3751 Feature: gene Location: 18738-19091 bp Feature: gene Location: 19455-19718 bp Feature: gene Location: 19657-20880 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19951-20572 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 9951 -20572 bp Feature: gene Location: 21302-22579 bp Feature: gene Location: 22579-23130 bp Feature: domain Description: DUF3751 Location: 22603-23044 bp Feature: domain Description: DUF3751 Location: 22603-23044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF3751 (pfam12571)

Seq: JAAISJ010000003.1 [Eubacterium] rectale strain MSK.13.48 NODE_3_length_221270_cov_293.903, whole genome shotgun sequence (221270 bp)
Overview 1 RT 1: 27405-31184 bp Neighborhood of RT #1 [27405, 31184] RVT-DGRs Feature: gene Location: 27405-27683 bp Feature: gene Location: 27869-28186 bp Feature: gene Location: 28105-29355 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28291-29032 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 82 91-2 9032 bp Feature: gene Location: 29469-30143 bp Feature: gene Location: 30198-31184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAISJ010000007.1 [Eubacterium] rectale strain MSK.13.48 NODE_7_length_140705_cov_306.923, whole genome shotgun sequence (140705 bp)
Overview 1 RT 1: 84034-89030 bp Neighborhood of RT #1 [84034, 89188] PRK05809 RVT-GII GIIM MATE_yoeA_like AcrR Feature: gene Location: 84034-84837 bp Feature: domain Description: PRK05809 Location: 84043-84826 bp Feature: domain Description: PRK05809 Location: 84043 -84826 bp Feature: gene Location: 85056-85298 bp Feature: gene Location: 85406-86800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85724-86348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85724-863 48 bp Feature: domain Description: GIIM Note: maturase Location: 86405-86615 bp Feature: domain Description: GIIM Note: maturase Location: 86405-86615 bp Feature: gene Location: 87025-88371 bp Feature: domain Description: MATE_yoeA_like Location: 87082-88363 bp Feature: domain Description: MATE_yoeA_like Location: 87082-883 63 bp Feature: gene Location: 88382-89188 bp Feature: domain Description: AcrR Location: 88577-89030 bp Feature: domain Description: AcrR Location: 88577-8903 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05809 (short-chain-enoyl-CoA hydratase), RVT-GII, GIIM (pfam08388), MATE_yoeA_like (cd13138), AcrR (COG1309)

Seq: JAAISJ010000009.1 [Eubacterium] rectale strain MSK.13.48 NODE_9_length_127428_cov_351.042, whole genome shotgun sequence (127428 bp)
Overview 1 RT 1: 14377-19013 bp Neighborhood of RT #1 [14377, 19013] RVT-DGRs Feature: gene Location: 14377-14568 bp Feature: gene Location: 14707-15090 bp Feature: gene Location: 14987-16258 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15287-15947 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15287-1594 7 bp Feature: gene Location: 16422-16571 bp Feature: gene Location: 16770-19013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs