myRT

myRT report for GCA_013304415.1_ASM1330441v1

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Seq: JAAIUM010000018.1 Blautia massiliensis strain MSK.18.38 NODE_18_length_88514_cov_40.9052, whole genome shotgun sequence (88514 bp)
Overview 1 RT 1: 62196-77997 bp Neighborhood of RT #1 [62196, 78152] ArdC YodL DUF3849 LPD18 LPD16 LPD16 KOG1000 RVT-GII Intron_maturas2 HNHc YtxK COG4646 Feature: gene Location: 62196-67550 bp Feature: domain Description: ArdC Location: 62418-63009 bp Feature: domain Description: ArdC Location: 6241 8-63009 bp Feature: domain Description: YodL Location: 64236-64527 bp Feature: domain Description: YodL Location: 64236-64527 bp Feature: domain Description: DUF3849 Location: 64584-64959 bp Feature: domain Description: DUF3849 Location: 64584-64959 bp Feature: domain Description: LPD18 Location: 64998-65244 bp Feature: domain Description: LPD1 8 Location: 64998-65244 bp Feature: domain Description: LPD16 Location: 65754-65982 bp Feature: domain Description: LPD1 6 Location: 65754-65982 bp Feature: domain Description: LPD16 Location: 66105-66309 bp Feature: domain Description: LPD1 6 Location: 661 05-66309 bp Feature: gene Location: 67590-69053 bp Feature: domain Description: KOG1000 Location: 67953-68178 bp Feature: domain Description: KOG1 000 Location: 67953-681 78 bp Feature: gene Location: 69194-70981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69464-70256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69464-70256 bp Feature: domain Description: Intron_maturas2 Location: 70361-70577 bp Feature: domain Description: Intron_maturas2 Location: 70361 -70577 bp Feature: domain Description: HNHc Note: nucleases Location: 70757-70943 bp Feature: domain Description: HNHc Note: nucleases Location: 70757-70943 bp Feature: gene Location: 71056-71301 bp Feature: gene Location: 71472-78152 bp Feature: domain Description: YtxK Location: 75156-75558 bp Feature: domain Description: YtxK Location: 751 56-75558 bp Feature: domain Description: COG4646 Location: 75627-77997 bp Feature: domain Description: COG4646 Location: 75627-77997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), YodL (pfam14191), DUF3849 (pfam12960), LPD18 (pfam18832), LPD16 (pfam18830), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YtxK (COG0827)
COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: JAAIUM010000062.1 Blautia massiliensis strain MSK.18.38 NODE_62_length_2777_cov_93.8927, whole genome shotgun sequence (2777 bp)
Overview 1 RT 1: 2-1918 bp Neighborhood of RT #1 [2, 2034] RVT-GII HNHc Feature: gene Location: 2-145 bp Feature: gene Location: 148-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-12 19 bp Feature: domain Description: HNHc Note: nucleases Location: 1768-1918 bp Feature: domain Description: HNHc Note: nucleases Location: 1768-1918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JAAIUM010000068.1 Blautia massiliensis strain MSK.18.38 NODE_68_length_1879_cov_70.1179, whole genome shotgun sequence (1879 bp)
Overview 1 RT 1: 158-1438 bp Neighborhood of RT #1 [158, 1788] RVT-GII Feature: gene Location: 158-403 bp Feature: gene Location: 493-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-143 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIUM010000006.1 Blautia massiliensis strain MSK.18.38 NODE_6_length_156515_cov_46.2539, whole genome shotgun sequence (156515 bp)
Overview 1 RT 1: 3233-6910 bp Neighborhood of RT #1 [3233, 6910] RVT-DGRs Feature: gene Location: 3233-4528 bp Feature: gene Location: 4622-4786 bp Feature: gene Location: 4893-6278 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5106-5850 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5106-5850 bp Feature: gene Location: 6187-6513 bp Feature: gene Location: 6725-6910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs