myRT

myRT report for GCA_013304445.1_ASM1330444v1

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Seq: JAAITA010000010.1 Blautia hansenii strain MSK.15.26 NODE_10_length_102663_cov_73.1628, whole genome shotgun sequence (102663 bp)
Overview 1 RT 1: 14836-21853 bp Neighborhood of RT #1 [14836, 21864] PRK13759 GGDEF_2 YesN RVT-GII group_II_RT_mat PnbA GrpB Ppa Feature: gene Location: 14836-16263 bp Feature: domain Description: PRK13759 Location: 14842-16195 bp Feature: domain Description: PRK1 3759 Location: 1 4842-1 61 95 bp Feature: gene Location: 16282-18270 bp Feature: domain Description: GGDEF_2 Location: 17470-17605 bp Feature: domain Description: GGDEF_2 Location: 1 7470-1 7605 bp Feature: domain Description: YesN Location: 17776-18250 bp Feature: domain Description: YesN Location: 1 7776-1 8250 bp Feature: gene Location: 18697-19029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18727-18883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8727-1 8883 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18919-19024 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 891 9-1 9024 bp Feature: gene Location: 19128-20684 bp Feature: domain Description: PnbA Location: 19161-20619 bp Feature: domain Description: PnbA Location: 1 91 61 -2061 9 bp Feature: gene Location: 20986-21864 bp Feature: domain Description: GrpB Location: 21013-21514 bp Feature: domain Description: GrpB Location: 21 01 3-21 51 4 bp Feature: domain Description: Ppa Location: 21547-21853 bp Feature: domain Description: Ppa Location: 21 547-21 853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13759 (arylsulfatase; Provisional), GGDEF_2 (pfam17853), YesN (COG4753), RVT-GII, group_II_RT_mat (TIGR04416), PnbA (COG2272), GrpB (pfam04229), Ppa (COG0221)

Seq: JAAITA010000011.1 Blautia hansenii strain MSK.15.26 NODE_11_length_101218_cov_71.4138, whole genome shotgun sequence (101218 bp)
Overview 1 RT 1: 40426-45258 bp Neighborhood of RT #1 [40426, 45494] GH4_alpha_glucosidase_galactosidase fliH RVT-Retrons SpoIIID AcrR Feature: gene Location: 40426-41829 bp Feature: domain Description: GH4_alpha_glucosidase_galactosidase Location: 40459-41788 bp Feature: domain Description: GH4_alpha_glucosidase_galactosidase Location: 40459-41788 bp Feature: gene Location: 42106-42972 bp Feature: domain Description: fliH Location: 42688-42937 bp Feature: domain Description: fliH Location: 42 688-42 937 bp Feature: gene Location: 43048-44022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43210-43768 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 432 10-43768 bp Feature: gene Location: 44371-44637 bp Feature: domain Description: SpoIIID Location: 44377-44614 bp Feature: domain Description: SpoIIID Location: 44377-44614 bp Feature: gene Location: 44847-45494 bp Feature: domain Description: AcrR Location: 44886-45258 bp Feature: domain Description: AcrR Location: 44886-452 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH4_alpha_glucosidase_galactosidase (cd05297), fliH (PRK13386), RVT-Retrons, SpoIIID (pfam12116), AcrR (COG1309)

Seq: JAAITA010000020.1 Blautia hansenii strain MSK.15.26 NODE_20_length_52910_cov_63.578, whole genome shotgun sequence (52910 bp)
Overview 1 RT 1: 48169-52666 bp Neighborhood of RT #1 [48169, 52794] Amidoligase_2 dcm RVT-GII GIIM SRP54_N SRP54_N Feature: gene Location: 48169-49122 bp Feature: domain Description: Amidoligase_2 Location: 48184-48901 bp Feature: domain Description: Amidoligase_2 Location: 48184-48901 bp Feature: gene Location: 49135-50412 bp Feature: domain Description: dcm Location: 49159-50377 bp Feature: domain Description: dcm Location: 49159-503 77 bp Feature: gene Location: 50500-51912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50851-51472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50851-51472 bp Feature: domain Description: GIIM Note: maturase Location: 51523-51733 bp Feature: domain Description: GIIM Note: maturase Location: 51523 -5173 3 bp Feature: gene Location: 51918-52160 bp Feature: gene Location: 52381-52794 bp Feature: domain Description: SRP54_N Location: 52420-52501 bp Feature: domain Description: SRP54_N Location: 52420-52501 bp Feature: domain Description: SRP54_N Location: 52546-52666 bp Feature: domain Description: SRP54_N Location: 52546-52666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amidoligase_2 (pfam12224), dcm (TIGR00675), RVT-GII, GIIM (pfam08388), SRP54_N (smart00963)

Seq: JAAITA010000003.1 Blautia hansenii strain MSK.15.26 NODE_3_length_245609_cov_66.4026, whole genome shotgun sequence (245609 bp)
Overview 1 RT 1: 201912-204016 bp Neighborhood of RT #1 [201912, 204027] RVT-GII group_II_RT_mat YgaK Feature: gene Location: 201912-202169 bp Feature: gene Location: 202193-202372 bp Feature: gene Location: 202369-203151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202720-203140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202720-20314 0 bp Feature: gene Location: 203175-203654 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 203190-203460 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 203190-2034 60 bp Feature: gene Location: 203866-204027 bp Feature: domain Description: YgaK Location: 203869-204016 bp Feature: domain Description: YgaK Location: 203869-204 016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), YgaK (COG1773)

Seq: JAAITA010000004.1 Blautia hansenii strain MSK.15.26 NODE_4_length_218033_cov_57.7231, whole genome shotgun sequence (218033 bp)
Overview 1 RT 1: 75020-77815 bp Neighborhood of RT #1 [75020, 77826] RVT-GII GIIM sigma70-ECF HTH_16 Feature: gene Location: 75020-75232 bp Feature: gene Location: 75234-75476 bp Feature: gene Location: 75584-76978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75902-76526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75 902-765 26 bp Feature: domain Description: GIIM Note: maturase Location: 76583-76793 bp Feature: domain Description: GIIM Note: maturase Location: 765 83-76793 bp Feature: gene Location: 77175-77612 bp Feature: domain Description: sigma70-ECF Location: 77325-77583 bp Feature: domain Description: sigma70-ECF Location: 77325 -775 83 bp Feature: gene Location: 77596-77826 bp Feature: domain Description: HTH_16 Location: 77638-77815 bp Feature: domain Description: HTH_16 Location: 77638-77815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), sigma70-ECF (TIGR02937), HTH_16 (pfam12645)