myRT

myRT report for GCA_013304465.1_ASM1330446v1

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Seq: JAAISZ010000026.1 Blautia obeum strain MSK.17.81 NODE_26_length_56402_cov_24.0208, whole genome shotgun sequence (56402 bp)
Overview 1 RT 1: 45942-49716 bp Neighborhood of RT #1 [45942, 49716] RVT-DGRs Feature: gene Location: 45942-47651 bp Feature: gene Location: 47783-47998 bp Feature: gene Location: 48069-48908 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48369-48894 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48369-48894 bp Feature: gene Location: 48909-49463 bp Feature: gene Location: 49315-49716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAISZ010000003.1 Blautia obeum strain MSK.17.81 NODE_3_length_172314_cov_26.6318, whole genome shotgun sequence (172314 bp)
Overview 1 RT 1: 122441-127745 bp Neighborhood of RT #1 [122441, 127834] Smc COG5412 PHA01351 COG5412 Sipho_tail RVT-DGRs Phage_holin_4_1 Feature: gene Location: 122441-125572 bp Feature: domain Description: Smc Location: 122492-122891 bp Feature: domain Description: Smc Location: 12 2 492 -12 2 891 bp Feature: domain Description: COG5412 Location: 123236-123716 bp Feature: domain Description: COG5412 Location: 12 32 36-12 3716 bp Feature: domain Description: PHA01351 Location: 123878-124478 bp Feature: domain Description: PHA01351 Location: 12 3878-12 4478 bp Feature: domain Description: COG5412 Location: 124550-125351 bp Feature: domain Description: COG5412 Location: 12 4550-12 5351 bp Feature: gene Location: 125576-126463 bp Feature: domain Description: Sipho_tail Location: 125666-126446 bp Feature: domain Description: Sipho_tail Location: 12 5666-12 6446 bp Feature: gene Location: 126468-127145 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 126729-126942 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 672 9-12 6942 bp Feature: gene Location: 127170-127349 bp Feature: gene Location: 127346-127834 bp Feature: domain Description: Phage_holin_4_1 Location: 127385-127745 bp Feature: domain Description: Phage_holin_4_1 Location: 12 7385-12 7745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Smc (COG1196), COG5412 (Phage-related protein ), PHA01351 (putative minor structural protein), Sipho_tail (pfam05709), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: JAAISZ010000044.1 Blautia obeum strain MSK.17.81 NODE_44_length_13638_cov_22.8518, whole genome shotgun sequence (13638 bp)
Overview 1 RT 1: 571-3510 bp Neighborhood of RT #1 [571, 3510] RVT-GII GIIM SpoIID_LytB SpoIID_LytB PGRP Feature: gene Location: 571-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-1513 bp Feature: domain Description: GIIM Note: maturase Location: 1594-1795 bp Feature: domain Description: GIIM Note: maturase Location: 1594-1795 bp Feature: gene Location: 2035-3303 bp Feature: domain Description: SpoIID_LytB Location: 2590-2713 bp Feature: domain Description: SpoIID_LytB Location: 2590-2713 bp Feature: domain Description: SpoIID_LytB Location: 2920-2995 bp Feature: domain Description: SpoIID_LytB Location: 2920-2995 bp Feature: domain Description: PGRP Location: 3037-3265 bp Feature: domain Description: PGRP Location: 3 03 7-3 265 bp Feature: gene Location: 3373-3510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoIID_LytB (TIGR02669), PGRP (smart00701), RVT-GII, GIIM (pfam08388)

Seq: JAAISZ010000005.1 Blautia obeum strain MSK.17.81 NODE_5_length_138084_cov_20.1707, whole genome shotgun sequence (138084 bp)
Overview 1 RT 1: 49612-56753 bp Neighborhood of RT #1 [49612, 56836] KOG1372 Cupin_2 HTH_ARAC RVT-GII fkp NolL Feature: gene Location: 49612-50661 bp Feature: domain Description: KOG1372 Location: 49618-50644 bp Feature: domain Description: KOG1372 Location: 4 9618-5064 4 bp Feature: gene Location: 50829-51740 bp Feature: domain Description: Cupin_2 Location: 51000-51096 bp Feature: domain Description: Cupin_2 Location: 51000-51096 bp Feature: domain Description: HTH_ARAC Location: 51486-51729 bp Feature: domain Description: HTH_ARAC Location: 514 86-51729 bp Feature: gene Location: 51810-55115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52065-52752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52065-52752 bp Feature: domain Description: fkp Location: 53004-55044 bp Feature: domain Description: fkp Location: 53004 -5504 4 bp Feature: gene Location: 55414-55608 bp Feature: gene Location: 55784-56836 bp Feature: domain Description: NolL Location: 55799-56753 bp Feature: domain Description: NolL Location: 55799-56753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1372 (KOG1372, GDP-mannose 4,6 dehydratase ), Cupin_2 (pfam07883), HTH_ARAC (smart00342), RVT-GII, fkp (PRK13412), NolL (COG3594)