myRT

myRT report for GCA_013304535.1_ASM1330453v1

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Seq: JAAITE010000113.1 Blautia wexlerae strain MSK.18.3 NODE_114_length_1635_cov_177.639, whole genome shotgun sequence (1635 bp)
Overview 1 RT 1: 194-1469 bp Neighborhood of RT #1 [194, 1633] RVT-GII Feature: gene Location: 194-337 bp Feature: gene Location: 389-577 bp Feature: gene Location: 608-1633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 2-1 469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAITE010000120.1 Blautia wexlerae strain MSK.18.3 NODE_122_length_1272_cov_347.156, whole genome shotgun sequence (1272 bp)
Overview 1 RT 1: 3-1272 bp Neighborhood of RT #1 [3, 1271] RVT-GII Feature: gene Location: 3-224 bp Feature: gene Location: 367-510 bp Feature: gene Location: 519-1271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-12 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAITE010000147.1 Blautia wexlerae strain MSK.18.3 NODE_150_length_649_cov_314.232, whole genome shotgun sequence (649 bp)
Overview 1 RT 1: 104-575 bp Neighborhood of RT #1 [104, 646] RVT-GII GIIM Feature: gene Location: 104-646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-290 bp Feature: domain Description: GIIM Note: maturase Location: 371-575 bp Feature: domain Description: GIIM Note: maturase Location: 3 71-575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAITE010000044.1 Blautia wexlerae strain MSK.18.3 NODE_44_length_24143_cov_163.362, whole genome shotgun sequence (24143 bp)
Overview 1 RT 1: 57-2150 bp Neighborhood of RT #1 [57, 2179] RVT-GII NTP_transferase VanZ Feature: gene Location: 57-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-24 3 bp Feature: gene Location: 656-1561 bp Feature: domain Description: NTP_transferase Location: 677-1466 bp Feature: domain Description: NTP_transferase Location: 677-14 66 bp Feature: gene Location: 1565-2179 bp Feature: domain Description: VanZ Location: 1781-2150 bp Feature: domain Description: VanZ Location: 1781-2150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VanZ (pfam04892), RVT-GII, NTP_transferase (pfam00483)

Seq: JAAITE010000053.1 Blautia wexlerae strain MSK.18.3 NODE_53_length_17407_cov_293.826, whole genome shotgun sequence (17407 bp)
Overview 1 RT 1: 1692-13144 bp Neighborhood of RT #1 [1692, 13144] NifX SlpA COG5263 MurNAc-LAA RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Feature: gene Location: 1692-2555 bp Feature: domain Description: NifX Location: 1695-2028 bp Feature: domain Description: NifX Location: 1695 -2028 bp Feature: domain Description: SlpA Location: 2145-2550 bp Feature: domain Description: SlpA Location: 2145 -25 5 0 bp Feature: gene Location: 2628-3596 bp Feature: domain Description: COG5263 Location: 2739-2970 bp Feature: domain Description: COG5 263 Location: 2739-2970 bp Feature: domain Description: MurNAc-LAA Location: 2979-3579 bp Feature: domain Description: MurNAc-LAA Location: 2979-35 79 bp Feature: gene Location: 3753-4397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3759-3945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375 9-3945 bp Feature: domain Description: GIIM Note: maturase Location: 4002-4224 bp Feature: domain Description: GIIM Note: maturase Location: 4002-4224 bp Feature: gene Location: 4548-5561 bp Feature: domain Description: Phage_int_SAM_1 Location: 4602-4848 bp Feature: domain Description: Phage_int_SAM_1 Location: 4602-4848 bp Feature: domain Description: INT_RitC_C_like Location: 4929-5475 bp Feature: domain Description: INT_RitC_C_like Location: 4929-5 475 bp Feature: gene Location: 5542-6525 bp Feature: domain Description: INT_RitB_C_like Location: 5878-6463 bp Feature: domain Description: INT_RitB_C_like Location: 5 878-6463 bp Feature: gene Location: 6518-7753 bp Feature: domain Description: Phage_int_SAM_1 Location: 6872-7094 bp Feature: domain Description: Phage_int_SAM_1 Location: 6872-7094 bp Feature: domain Description: INT_RitA_C_like Location: 7187-7727 bp Feature: domain Description: INT_RitA_C_like Location: 7187-7727 bp Feature: gene Location: 7869-8621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8187-8568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8187-85 68 bp Feature: gene Location: 8731-9039 bp Feature: gene Location: 9140-13144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifX (COG1433), SlpA (COG1047), COG5263 (Glucan-binding domain (YG repeat) ), MurNAc-LAA (cl02713), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188)

Seq: JAAITE010000005.1 Blautia wexlerae strain MSK.18.3 NODE_5_length_137092_cov_316.804, whole genome shotgun sequence (137092 bp)
Overview 1 RT 1: 31587-34509 bp Neighborhood of RT #1 [31587, 34514] Cytidylate_kin2 RVT-GII GIIM COG4603 PRK08323 Feature: gene Location: 31587-31874 bp Feature: domain Description: Cytidylate_kin2 Location: 31593-31779 bp Feature: domain Description: Cytidylate_kin2 Location: 31593-31779 bp Feature: gene Location: 31903-32412 bp Feature: gene Location: 32445-33734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32736-33369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32736 -3336 9 bp Feature: domain Description: GIIM Note: maturase Location: 33450-33666 bp Feature: domain Description: GIIM Note: maturase Location: 33450-336 6 6 bp Feature: gene Location: 33889-34095 bp Feature: domain Description: COG4603 Location: 33895-34039 bp Feature: domain Description: COG46 03 Location: 33895-34039 bp Feature: gene Location: 34122-34514 bp Feature: domain Description: PRK08323 Location: 34173-34509 bp Feature: domain Description: PRK08323 Location: 34173-34509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cytidylate_kin2 (pfam13189), RVT-GII, GIIM (pfam08388), COG4603 (ABC-type uncharacterized transport system, permease component ), PRK08323 (phenylhydantoinase; Validated)

Seq: JAAITE010000007.1 Blautia wexlerae strain MSK.18.3 NODE_7_length_125218_cov_184.768, whole genome shotgun sequence (125218 bp)
Overview 1 RT 1: 362-3186 bp Neighborhood of RT #1 [362, 3186] HTH_Tnp_1 PHA02517 RVT-GII Feature: gene Location: 362-712 bp Feature: domain Description: HTH_Tnp_1 Location: 422-653 bp Feature: domain Description: HTH_Tnp_1 Location: 422-653 bp Feature: gene Location: 709-1632 bp Feature: domain Description: PHA02517 Location: 811-1606 bp Feature: domain Description: PHA02517 Location: 811-1606 bp Feature: gene Location: 1664-2455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2426 bp Feature: gene Location: 2810-2947 bp Feature: gene Location: 3010-3186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)