myRT

myRT report for GCA_013304735.1_ASM1330473v1

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Seq: JAAITI010000020.1 Blautia luti strain MSK.16.34 NODE_20_length_64445_cov_134.906, whole genome shotgun sequence (64445 bp)
Overview 1 RT 1: 18643-21942 bp Neighborhood of RT #1 [18643, 21942] Phage_XkdX RVT-DGRs Feature: gene Location: 18643-18795 bp Feature: domain Description: Phage_XkdX Location: 18664-18775 bp Feature: domain Description: Phage_XkdX Location: 1 8664-1 8775 bp Feature: gene Location: 18797-19111 bp Feature: gene Location: 18948-20246 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19212-19839 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 921 2-1 9839 bp Feature: gene Location: 20329-20523 bp Feature: gene Location: 20704-21942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: JAAITI010000043.1 Blautia luti strain MSK.16.34 NODE_43_length_28011_cov_133.65, whole genome shotgun sequence (28011 bp)
Overview 1 RT 1: 22590-28011 bp Neighborhood of RT #1 [22590, 28010] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C Maff2 Feature: gene Location: 22590-23081 bp Feature: domain Description: DUF3801 Location: 22656-23049 bp Feature: domain Description: DUF3801 Location: 2 2 656-2 3049 bp Feature: gene Location: 23078-23983 bp Feature: domain Description: VirD4 Location: 23345-23699 bp Feature: domain Description: VirD4 Location: 2 3345-2 3699 bp Feature: domain Description: VirD4 Location: 23789-23945 bp Feature: domain Description: VirD4 Location: 2 3789-2 3945 bp Feature: gene Location: 24642-26549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24972-25716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4972 -2 5716 bp Feature: gene Location: 26828-27715 bp Feature: domain Description: TraG-D_C Location: 27161-27515 bp Feature: domain Description: TraG-D_C Location: 2 7161-2 7515 bp Feature: gene Location: 27831-28010 bp Feature: domain Description: Maff2 Location: 27840-28011 bp Feature: domain Description: Maff2 Location: 2 7840-2 8011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Maff2 (pfam12750)

Seq: JAAITI010000061.1 Blautia luti strain MSK.16.34 NODE_61_length_10098_cov_115.669, whole genome shotgun sequence (10098 bp)
Overview 1 RT 1: 5239-9908 bp Neighborhood of RT #1 [5239, 9908] TTRAP YodL LPD18 DUF4316 RVT-UNC RES Feature: gene Location: 5239-5490 bp Feature: domain Description: TTRAP Location: 5263-5437 bp Feature: domain Description: TTRAP Location: 5263 -543 7 bp Feature: gene Location: 5487-6407 bp Feature: domain Description: YodL Location: 5502-5799 bp Feature: domain Description: YodL Location: 5502-5799 bp Feature: domain Description: LPD18 Location: 5820-6072 bp Feature: domain Description: LPD18 Location: 5820-6072 bp Feature: domain Description: DUF4316 Location: 6189-6318 bp Feature: domain Description: DUF43 16 Location: 6189-63 18 bp Feature: gene Location: 6539-8086 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6962-7244 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6962-7244 bp Feature: gene Location: 8143-9306 bp Feature: domain Description: RES Location: 8395-8758 bp Feature: domain Description: RES Location: 83 95-8758 bp Feature: gene Location: 9702-9908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTRAP (pfam14203), YodL (pfam14191), LPD18 (pfam18832), DUF4316 (pfam14195), RVT-UG12/RVT-UG14/RVT-AbiP2/RVT-UG8(RVT-UNC), RES (smart00953)

Seq: JAAITI010000075.1 Blautia luti strain MSK.16.34 NODE_76_length_2984_cov_140.777, whole genome shotgun sequence (2984 bp)
Overview 1 RT 1: 158-2982 bp Neighborhood of RT #1 [158, 2982] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 158-1990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-1253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 22-1253 bp Feature: domain Description: Intron_maturas2 Location: 1325-1640 bp Feature: domain Description: Intron_maturas2 Location: 1325-164 0 bp Feature: domain Description: HNHc Note: nucleases Location: 1787-1961 bp Feature: domain Description: HNHc Note: nucleases Location: 1787-1961 bp Feature: gene Location: 2236-2451 bp Feature: gene Location: 2566-2982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JAAITI010000077.1 Blautia luti strain MSK.16.34 NODE_78_length_2771_cov_576.83, whole genome shotgun sequence (2771 bp)
Overview 1 RT 1: 2-1918 bp Neighborhood of RT #1 [2, 2034] RVT-GII HNHc Feature: gene Location: 2-145 bp Feature: gene Location: 148-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1219 bp Feature: domain Description: HNHc Note: nucleases Location: 1768-1918 bp Feature: domain Description: HNHc Note: nucleases Location: 1768-1918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JAAITI010000081.1 Blautia luti strain MSK.16.34 NODE_82_length_1798_cov_420.706, whole genome shotgun sequence (1798 bp)
Overview 1 RT 1: 26-1439 bp Neighborhood of RT #1 [26, 1439] RVT-GII GIIM Feature: gene Location: 26-1309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236-851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236 -851 bp Feature: domain Description: GIIM Note: maturase Location: 911-1136 bp Feature: domain Description: GIIM Note: maturase Location: 911-1136 bp Feature: gene Location: 1296-1439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAITI010000008.1 Blautia luti strain MSK.16.34 NODE_8_length_140247_cov_225.262, whole genome shotgun sequence (140247 bp)
Overview 1 RT 1: 15109-20566 bp Neighborhood of RT #1 [15109, 20580] YodL LPD16 DUF4316 LPD25 RVT-GII RlmN Feature: gene Location: 15109-17859 bp Feature: domain Description: YodL Location: 15889-16183 bp Feature: domain Description: YodL Location: 15889-16183 bp Feature: domain Description: LPD16 Location: 16213-16435 bp Feature: domain Description: LPD16 Location: 16213-16435 bp Feature: domain Description: DUF4316 Location: 16483-16567 bp Feature: domain Description: DUF4316 Location: 16483-16567 bp Feature: domain Description: LPD25 Location: 17176-17473 bp Feature: domain Description: LPD25 Location: 17 17 6-17 47 3 bp Feature: gene Location: 18117-18329 bp Feature: gene Location: 18343-18975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18694-18937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18694-18937 bp Feature: gene Location: 19050-19310 bp Feature: gene Location: 19597-20580 bp Feature: domain Description: RlmN Location: 19741-20566 bp Feature: domain Description: RlmN Location: 197 41-20566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840), RVT-GII, RlmN (COG0820)