myRT

myRT report for GCA_013304785.1_ASM1330478v1

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Seq: JAAITN010000102.1 Blautia wexlerae strain MSK.18.96 NODE_104_length_1635_cov_225.895, whole genome shotgun sequence (1635 bp)
Overview 1 RT 1: 194-1469 bp Neighborhood of RT #1 [194, 1633] RVT-GII Feature: gene Location: 194-337 bp Feature: gene Location: 389-577 bp Feature: gene Location: 608-1633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 2-1 469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAITN010000108.1 Blautia wexlerae strain MSK.18.96 NODE_110_length_1272_cov_438.465, whole genome shotgun sequence (1272 bp)
Overview 1 RT 1: 3-1272 bp Neighborhood of RT #1 [3, 1271] RVT-GII Feature: gene Location: 3-224 bp Feature: gene Location: 367-510 bp Feature: gene Location: 519-1271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-12 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAITN010000135.1 Blautia wexlerae strain MSK.18.96 NODE_155_length_649_cov_414.502, whole genome shotgun sequence (649 bp)
Overview 1 RT 1: 104-575 bp Neighborhood of RT #1 [104, 646] RVT-GII GIIM Feature: gene Location: 104-646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-290 bp Feature: domain Description: GIIM Note: maturase Location: 371-575 bp Feature: domain Description: GIIM Note: maturase Location: 3 71-575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAITN010000024.1 Blautia wexlerae strain MSK.18.96 NODE_24_length_65384_cov_286.676, whole genome shotgun sequence (65384 bp)
Overview 1 RT 1: 32996-38910 bp 2 RT 2: 48225-62940 bp Neighborhood of RT #1 [32996, 38910] VirD4 Maff2 RVT-GII HNHc Neighborhood of RT #2 [48225, 64181] YtxK COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 ArdC YodL DUF3849 LPD18 LPD16 LPD16 Feature: gene Location: 32996-34891 bp Feature: domain Description: VirD4 Location: 33296-34721 bp Feature: domain Description: VirD4 Location: 33296-34 721 bp Feature: gene Location: 35033-35164 bp Feature: domain Description: Maff2 Location: 35036-35162 bp Feature: domain Description: Maff2 Location: 35036-35162 bp Feature: gene Location: 35884-37770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36217-36955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36217-36955 bp Feature: domain Description: HNHc Note: nucleases Location: 37504-37654 bp Feature: domain Description: HNHc Note: nucleases Location: 37504 -37654 bp Feature: gene Location: 37789-37941 bp Feature: gene Location: 38041-38910 bp Feature: gene Location: 48225-54905 bp Feature: domain Description: YtxK Location: 51909-52311 bp Feature: domain Description: YtxK Location: 51909-52311 bp Feature: domain Description: COG4646 Location: 52380-54750 bp Feature: domain Description: COG4 64 6 Location: 52380-54 750 bp Feature: gene Location: 55076-55321 bp Feature: gene Location: 55396-57183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55666-56458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55666-564 58 bp Feature: domain Description: Intron_maturas2 Location: 56563-56779 bp Feature: domain Description: Intron_maturas2 Location: 56563-56779 bp Feature: domain Description: HNHc Note: nucleases Location: 56959-57145 bp Feature: domain Description: HNHc Note: nucleases Location: 56959-5714 5 bp Feature: gene Location: 57324-58787 bp Feature: domain Description: KOG1000 Location: 57687-57912 bp Feature: domain Description: KOG1000 Location: 57687-57912 bp Feature: gene Location: 58827-64181 bp Feature: domain Description: ArdC Location: 59049-59640 bp Feature: domain Description: ArdC Location: 5904 9-5964 0 bp Feature: domain Description: YodL Location: 60867-61158 bp Feature: domain Description: YodL Location: 60867-61158 bp Feature: domain Description: DUF3849 Location: 61215-61590 bp Feature: domain Description: DUF384 9 Location: 61215-61590 bp Feature: domain Description: LPD18 Location: 61629-61875 bp Feature: domain Description: LPD18 Location: 61629-61875 bp Feature: domain Description: LPD16 Location: 62385-62613 bp Feature: domain Description: LPD16 Location: 62385-62613 bp Feature: domain Description: LPD16 Location: 62736-62940 bp Feature: domain Description: LPD16 Location: 62736-6294 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), Intron_maturas2 (pfam01348), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), ArdC (COG4227), YodL (pfam14191)
DUF3849 (pfam12960), LPD18 (pfam18832), LPD16 (pfam18830)

Seq: JAAITN010000042.1 Blautia wexlerae strain MSK.18.96 NODE_42_length_24143_cov_223.136, whole genome shotgun sequence (24143 bp)
Overview 1 RT 1: 57-2150 bp Neighborhood of RT #1 [57, 2179] RVT-GII NTP_transferase VanZ Feature: gene Location: 57-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-243 bp Feature: gene Location: 656-1561 bp Feature: domain Description: NTP_transferase Location: 677-1466 bp Feature: domain Description: NTP_transferase Location: 677-1466 bp Feature: gene Location: 1565-2179 bp Feature: domain Description: VanZ Location: 1781-2150 bp Feature: domain Description: VanZ Location: 1781-215 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VanZ (pfam04892), RVT-GII, NTP_transferase (pfam00483)

Seq: JAAITN010000050.1 Blautia wexlerae strain MSK.18.96 NODE_50_length_17447_cov_382, whole genome shotgun sequence (17447 bp)
Overview 1 RT 1: 1732-13184 bp Neighborhood of RT #1 [1732, 13184] NifX SlpA COG5263 MurNAc-LAA RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Feature: gene Location: 1732-2595 bp Feature: domain Description: NifX Location: 1735-2068 bp Feature: domain Description: NifX Location: 1735-206 8 bp Feature: domain Description: SlpA Location: 2185-2590 bp Feature: domain Description: SlpA Location: 2185-2590 bp Feature: gene Location: 2668-3636 bp Feature: domain Description: COG5263 Location: 2779-3010 bp Feature: domain Description: COG526 3 Location: 2779-3010 bp Feature: domain Description: MurNAc-LAA Location: 3019-3619 bp Feature: domain Description: MurNAc-LAA Location: 3019-36 19 bp Feature: gene Location: 3793-4437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3799-3985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3799-3985 bp Feature: domain Description: GIIM Note: maturase Location: 4042-4264 bp Feature: domain Description: GIIM Note: maturase Location: 4042-426 4 bp Feature: gene Location: 4588-5601 bp Feature: domain Description: Phage_int_SAM_1 Location: 4642-4888 bp Feature: domain Description: Phage_int_SAM_1 Location: 46 42-4888 bp Feature: domain Description: INT_RitC_C_like Location: 4969-5515 bp Feature: domain Description: INT_RitC_C_like Location: 496 9-5515 bp Feature: gene Location: 5582-6565 bp Feature: domain Description: INT_RitB_C_like Location: 5918-6503 bp Feature: domain Description: INT_RitB_C_like Location: 5918-6 503 bp Feature: gene Location: 6558-7793 bp Feature: domain Description: Phage_int_SAM_1 Location: 6912-7134 bp Feature: domain Description: Phage_int_SAM_1 Location: 6 912-7134 bp Feature: domain Description: INT_RitA_C_like Location: 7227-7767 bp Feature: domain Description: INT_RitA_C_like Location: 7227-776 7 bp Feature: gene Location: 7909-8661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8227-8608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8227-86 08 bp Feature: gene Location: 8771-9079 bp Feature: gene Location: 9180-13184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifX (COG1433), SlpA (COG1047), COG5263 (Glucan-binding domain (YG repeat) ), MurNAc-LAA (cl02713), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188)

Seq: JAAITN010000007.1 Blautia wexlerae strain MSK.18.96 NODE_7_length_125218_cov_234.669, whole genome shotgun sequence (125218 bp)
Overview 1 RT 1: 362-3186 bp Neighborhood of RT #1 [362, 3186] HTH_Tnp_1 PHA02517 RVT-GII Feature: gene Location: 362-712 bp Feature: domain Description: HTH_Tnp_1 Location: 422-653 bp Feature: domain Description: HTH_Tnp_1 Location: 422-653 bp Feature: gene Location: 709-1632 bp Feature: domain Description: PHA02517 Location: 811-1606 bp Feature: domain Description: PHA02517 Location: 811-1606 bp Feature: gene Location: 1664-2455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2426 bp Feature: gene Location: 2810-2947 bp Feature: gene Location: 3010-3186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JAAITN010000009.1 Blautia wexlerae strain MSK.18.96 NODE_9_length_106285_cov_383.898, whole genome shotgun sequence (106285 bp)
Overview 1 RT 1: 74401-77323 bp Neighborhood of RT #1 [74401, 77328] Cytidylate_kin2 RVT-GII GIIM COG4603 PRK08323 Feature: gene Location: 74401-74688 bp Feature: domain Description: Cytidylate_kin2 Location: 74407-74593 bp Feature: domain Description: Cytidylate_kin2 Location: 74407-74593 bp Feature: gene Location: 74717-75226 bp Feature: gene Location: 75259-76548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75550-76183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75550-7618 3 bp Feature: domain Description: GIIM Note: maturase Location: 76264-76480 bp Feature: domain Description: GIIM Note: maturase Location: 76264-7648 0 bp Feature: gene Location: 76703-76909 bp Feature: domain Description: COG4603 Location: 76709-76853 bp Feature: domain Description: COG4603 Location: 76709-768 53 bp Feature: gene Location: 76936-77328 bp Feature: domain Description: PRK08323 Location: 76987-77323 bp Feature: domain Description: PRK08 323 Location: 7698 7-77323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cytidylate_kin2 (pfam13189), RVT-GII, GIIM (pfam08388), COG4603 (ABC-type uncharacterized transport system, permease component ), PRK08323 (phenylhydantoinase; Validated)