myRT

myRT report for GCA_013304855.1_ASM1330485v1

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Seq: JAAITO010000116.1 Blautia wexlerae strain MSK.18.55 NODE_117_length_1635_cov_235.468, whole genome shotgun sequence (1635 bp)
Overview 1 RT 1: 194-1469 bp Neighborhood of RT #1 [194, 1633] RVT-GII Feature: gene Location: 194-337 bp Feature: gene Location: 389-577 bp Feature: gene Location: 608-1633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 2-1 469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAITO010000124.1 Blautia wexlerae strain MSK.18.55 NODE_126_length_1272_cov_452.706, whole genome shotgun sequence (1272 bp)
Overview 1 RT 1: 3-1272 bp Neighborhood of RT #1 [3, 1271] RVT-GII Feature: gene Location: 3-224 bp Feature: gene Location: 367-510 bp Feature: gene Location: 519-1271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-12 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAITO010000147.1 Blautia wexlerae strain MSK.18.55 NODE_155_length_649_cov_434.7, whole genome shotgun sequence (649 bp)
Overview 1 RT 1: 104-575 bp Neighborhood of RT #1 [104, 646] RVT-GII GIIM Feature: gene Location: 104-646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-290 bp Feature: domain Description: GIIM Note: maturase Location: 371-575 bp Feature: domain Description: GIIM Note: maturase Location: 3 71-575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAITO010000044.1 Blautia wexlerae strain MSK.18.55 NODE_44_length_24143_cov_231.607, whole genome shotgun sequence (24143 bp)
Overview 1 RT 1: 57-2150 bp Neighborhood of RT #1 [57, 2179] RVT-GII NTP_transferase VanZ Feature: gene Location: 57-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-24 3 bp Feature: gene Location: 656-1561 bp Feature: domain Description: NTP_transferase Location: 677-1466 bp Feature: domain Description: NTP_transferase Location: 677-14 66 bp Feature: gene Location: 1565-2179 bp Feature: domain Description: VanZ Location: 1781-2150 bp Feature: domain Description: VanZ Location: 1781-2150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VanZ (pfam04892), RVT-GII, NTP_transferase (pfam00483)

Seq: JAAITO010000054.1 Blautia wexlerae strain MSK.18.55 NODE_54_length_17447_cov_383.78, whole genome shotgun sequence (17447 bp)
Overview 1 RT 1: 1732-13184 bp Neighborhood of RT #1 [1732, 13184] NifX SlpA COG5263 MurNAc-LAA RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Feature: gene Location: 1732-2595 bp Feature: domain Description: NifX Location: 1735-2068 bp Feature: domain Description: NifX Location: 1735 -2068 bp Feature: domain Description: SlpA Location: 2185-2590 bp Feature: domain Description: SlpA Location: 2185 -25 90 bp Feature: gene Location: 2668-3636 bp Feature: domain Description: COG5263 Location: 2779-3010 bp Feature: domain Description: COG5 263 Location: 2779-3010 bp Feature: domain Description: MurNAc-LAA Location: 3019-3619 bp Feature: domain Description: MurNAc-LAA Location: 3019-3619 bp Feature: gene Location: 3793-4437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3799-3985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3799-3985 bp Feature: domain Description: GIIM Note: maturase Location: 4042-4264 bp Feature: domain Description: GIIM Note: maturase Location: 4042-4264 bp Feature: gene Location: 4588-5601 bp Feature: domain Description: Phage_int_SAM_1 Location: 4642-4888 bp Feature: domain Description: Phage_int_SAM_1 Location: 4642-4888 bp Feature: domain Description: INT_RitC_C_like Location: 4969-5515 bp Feature: domain Description: INT_RitC_C_like Location: 4969-5 5 15 bp Feature: gene Location: 5582-6565 bp Feature: domain Description: INT_RitB_C_like Location: 5918-6503 bp Feature: domain Description: INT_RitB_C_like Location: 5 918-65 03 bp Feature: gene Location: 6558-7793 bp Feature: domain Description: Phage_int_SAM_1 Location: 6912-7134 bp Feature: domain Description: Phage_int_SAM_1 Location: 6912-7134 bp Feature: domain Description: INT_RitA_C_like Location: 7227-7767 bp Feature: domain Description: INT_RitA_C_like Location: 7227-7767 bp Feature: gene Location: 7909-8661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8227-8608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8227-8608 bp Feature: gene Location: 8771-9079 bp Feature: gene Location: 9180-13184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifX (COG1433), SlpA (COG1047), COG5263 (Glucan-binding domain (YG repeat) ), MurNAc-LAA (cl02713), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188)

Seq: JAAITO010000008.1 Blautia wexlerae strain MSK.18.55 NODE_8_length_125218_cov_240.136, whole genome shotgun sequence (125218 bp)
Overview 1 RT 1: 362-3186 bp Neighborhood of RT #1 [362, 3186] HTH_Tnp_1 PHA02517 RVT-GII Feature: gene Location: 362-712 bp Feature: domain Description: HTH_Tnp_1 Location: 422-653 bp Feature: domain Description: HTH_Tnp_1 Location: 422-6 53 bp Feature: gene Location: 709-1632 bp Feature: domain Description: PHA02517 Location: 811-1606 bp Feature: domain Description: PHA02517 Location: 811-16 06 bp Feature: gene Location: 1664-2455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865-2426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186 5-2426 bp Feature: gene Location: 2810-2947 bp Feature: gene Location: 3010-3186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)