myRT

myRT report for GCA_013305115.1_ASM1330511v1

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Seq: JAAITW010000016.1 Blautia glucerasea strain MSK.14.58 NODE_16_length_102568_cov_76.7453, whole genome shotgun sequence (102568 bp)
Overview 1 RT 1: 83852-88651 bp Neighborhood of RT #1 [83852, 89043] TnpV YhcG RVT-GII MATE_yoeA_like DDE_5 Feature: gene Location: 83852-84016 bp Feature: domain Description: TnpV Location: 83882-83933 bp Feature: domain Description: TnpV Location: 83882-83933 bp Feature: gene Location: 84141-85124 bp Feature: domain Description: YhcG Location: 84615-85086 bp Feature: domain Description: YhcG Location: 8461 5-85086 bp Feature: gene Location: 85191-86048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85509-85857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85509-85857 bp Feature: gene Location: 86164-87579 bp Feature: domain Description: MATE_yoeA_like Location: 86269-87550 bp Feature: domain Description: MATE_yoeA_like Location: 86269-87550 bp Feature: gene Location: 88144-89043 bp Feature: domain Description: DDE_5 Location: 88174-88651 bp Feature: domain Description: DDE_5 Location: 881 74-88651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), YhcG (COG4804), RVT-GII, MATE_yoeA_like (cd13138), DDE_5 (pfam13546)

Seq: JAAITW010000006.1 Blautia glucerasea strain MSK.14.58 NODE_6_length_133776_cov_57.2559, whole genome shotgun sequence (133776 bp)
Overview 1 RT 1: 129421-133775 bp Neighborhood of RT #1 [129421, 133775] DUF4250 chaperone_ClpB RVT-GII Phage_integrase Feature: gene Location: 129421-129594 bp Feature: domain Description: DUF4250 Location: 129427-129589 bp Feature: domain Description: DUF42 50 Location: 12 942 7-12 9589 bp Feature: gene Location: 129629-132211 bp Feature: domain Description: chaperone_ClpB Location: 129647-132191 bp Feature: domain Description: chaperone_ClpB Location: 12 9647-132 191 bp Feature: gene Location: 132528-133244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132819-132969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 819-132 969 bp Feature: domain Description: Phage_integrase Location: 132981-133176 bp Feature: domain Description: Phage_integrase Location: 132 981-133176 bp Feature: gene Location: 133401-133775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4250 (pfam14056), chaperone_ClpB (TIGR03346), RVT-GII, Phage_integrase (pfam00589)

Seq: JAAITW010000070.1 Blautia glucerasea strain MSK.14.58 NODE_70_length_4969_cov_77.9522, whole genome shotgun sequence (4969 bp)
Overview 1 RT 1: 2-4944 bp Neighborhood of RT #1 [2, 4967] RVT_N RVT-GII GIIM SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 COG4646 Feature: gene Location: 2-457 bp Feature: gene Location: 458-2035 bp Feature: RT Description: RVT_N Location: 461-653 bp Feature: RT Description: RVT_N Location: 461-653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698-13 46 bp Feature: domain Description: GIIM Note: maturase Location: 1400-1631 bp Feature: domain Description: GIIM Note: maturase Location: 1400-163 1 bp Feature: gene Location: 2023-3750 bp Feature: domain Description: SR_TndX_transposase Location: 2047-2464 bp Feature: domain Description: SR_TndX_transposase Location: 2047-2464 bp Feature: domain Description: Recombinase Location: 2569-2932 bp Feature: domain Description: Recombinase Location: 2569-293 2 bp Feature: domain Description: Zn_ribbon_recom Location: 2977-3160 bp Feature: domain Description: Zn_ribbon_recom Location: 2977-3 160 bp Feature: domain Description: DUF4368 Location: 3433-3631 bp Feature: domain Description: DUF43 68 Location: 3 43 3 -3 63 1 bp Feature: gene Location: 3924-4967 bp Feature: domain Description: COG4646 Location: 3933-4944 bp Feature: domain Description: COG4646 Location: 3 93 3 -4944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAITW010000072.1 Blautia glucerasea strain MSK.14.58 NODE_72_length_4446_cov_49.0137, whole genome shotgun sequence (4446 bp)
Overview 1 RT 1: 62-4441 bp Neighborhood of RT #1 [62, 4443] HxlR RVT-GII COG1373 Y2_Tnp Feature: gene Location: 62-394 bp Feature: domain Description: HxlR Location: 80-389 bp Feature: domain Description: HxlR Location: 80-389 bp Feature: gene Location: 578-823 bp Feature: gene Location: 913-2208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1168-1858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1168-1858 bp Feature: gene Location: 2585-3853 bp Feature: domain Description: COG1373 Location: 2603-3833 bp Feature: domain Description: COG1373 Location: 2603-3833 bp Feature: gene Location: 4027-4443 bp Feature: domain Description: Y2_Tnp Location: 4042-4441 bp Feature: domain Description: Y2_Tnp Location: 4 04 2-4 4 4 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), Y2_Tnp (pfam04986), HxlR (pfam01638), RVT-GII

Seq: JAAITW010000074.1 Blautia glucerasea strain MSK.14.58 NODE_74_length_4087_cov_75.3229, whole genome shotgun sequence (4087 bp)
Overview 1 RT 1: 3-4044 bp Neighborhood of RT #1 [3, 4085] TraG-D_C RVT-GII T4SS-DNA_transf T4SS-DNA_transf Feature: gene Location: 3-818 bp Feature: domain Description: TraG-D_C Location: 471-816 bp Feature: domain Description: TraG-D_C Location: 471-816 bp Feature: gene Location: 962-2869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1292-2036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1292-2036 bp Feature: gene Location: 2892-3137 bp Feature: gene Location: 3528-4085 bp Feature: domain Description: T4SS-DNA_transf Location: 3651-3795 bp Feature: domain Description: T4SS-DNA_transf Location: 365 1-3795 bp Feature: domain Description: T4SS-DNA_transf Location: 3882-4044 bp Feature: domain Description: T4SS-DNA_transf Location: 3882-4044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), TraG-D_C (pfam12696), RVT-GII

Seq: JAAITW010000088.1 Blautia glucerasea strain MSK.14.58 NODE_88_length_1903_cov_151.381, whole genome shotgun sequence (1903 bp)
Overview 1 RT 1: 358-1411 bp Neighborhood of RT #1 [358, 1764] RVT-GII Feature: gene Location: 358-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII