myRT

myRT report for GCA_013309895.1_ASM1330989v1

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Seq: JAAXCS010000117.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_121, whole genome shotgun sequence (4021 bp)
Overview 1 RT 1: 3-3320 bp Neighborhood of RT #1 [3, 3320] PRK03557 RVT-GII GIIM group_II_RT_mat Feature: gene Location: 3-641 bp Feature: domain Description: PRK03557 Location: 6-624 bp Feature: domain Description: PRK03557 Location: 6-624 bp Feature: gene Location: 875-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 -1 448 bp Feature: domain Description: GIIM Note: maturase Location: 1532-1748 bp Feature: domain Description: GIIM Note: maturase Location: 1 532-1 748 bp Feature: gene Location: 1836-2096 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1872-2058 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 872-2058 bp Feature: gene Location: 2574-3320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03557 (CDF family zinc transporter ZitB), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: JAAXCS010000142.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_146, whole genome shotgun sequence (2984 bp)
Overview 1 RT 1: 2-2806 bp Neighborhood of RT #1 [2, 2826] RVT-GII RVT-GII GIIM PDDEXK_2 YadD Feature: gene Location: 2-157 bp Feature: gene Location: 529-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 -112 6 bp Feature: gene Location: 1166-1777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172-1391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172 -1391 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1694 bp Feature: domain Description: GIIM Note: maturase Location: 1472 -1694 bp Feature: gene Location: 1774-2826 bp Feature: domain Description: PDDEXK_2 Location: 1864-2539 bp Feature: domain Description: PDDEXK_2 Location: 1864-2 539 bp Feature: domain Description: YadD Location: 2623-2806 bp Feature: domain Description: YadD Location: 2 62 3-2 806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PDDEXK_2 (pfam12784), YadD (COG5464)

Seq: JAAXCS010000179.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_187, whole genome shotgun sequence (1691 bp)
Overview 1 RT 1: 535-1514 bp Neighborhood of RT #1 [535, 1514] RVT-GII Feature: gene Location: 535-717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553 -712 bp Feature: gene Location: 1356-1514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAXCS010000002.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_2, whole genome shotgun sequence (30669 bp)
Overview 1 RT 1: 23394-30434 bp Neighborhood of RT #1 [23394, 30628] ATPase_2 L1-EN RVT-UNC L1-EN RVT-UNC Feature: gene Location: 23394-23603 bp Feature: gene Location: 23667-24590 bp Feature: domain Description: ATPase_2 Location: 23682-24054 bp Feature: domain Description: ATPase_2 Location: 23682-24 054 bp Feature: gene Location: 24766-27711 bp Feature: domain Description: L1-EN Location: 24868-25579 bp Feature: domain Description: L1-EN Location: 24 868-25579 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 26440-27064 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 264 4 0-27064 bp Feature: gene Location: 28244-30628 bp Feature: domain Description: L1-EN Location: 28250-28868 bp Feature: domain Description: L1-EN Location: 28250-28868 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 29723-30434 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 29723-304 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ATPase_2 (pfam01637), L1-EN (cd09076), RVT-UG27/RVT-CRISPR/RVT-GII(RVT-UNC), RVT-GII/RVT-CRISPR/RVT-UG2(RVT-UNC)

Seq: JAAXCS010000041.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_41, whole genome shotgun sequence (10286 bp)
Overview 1 RT 1: 8117-10279 bp Neighborhood of RT #1 [8117, 10284] RVT_N RVT-GII Feature: gene Location: 8117-8707 bp Feature: gene Location: 8717-8872 bp Feature: gene Location: 9742-10284 bp Feature: domain Description: RVT_N Location: 9748-9892 bp Feature: domain Description: RVT_N Location: 9748-9892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9940-10279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9940-10279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAXCS010000048.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_48, whole genome shotgun sequence (9542 bp)
Overview 1 RT 1: 2915-6806 bp Neighborhood of RT #1 [2915, 6811] lysidine_TilS_N RVT-GII group_II_RT_mat KOG3196 Feature: gene Location: 2915-4186 bp Feature: domain Description: lysidine_TilS_N Location: 2975-3509 bp Feature: domain Description: lysidine_TilS_N Location: 2975-3509 bp Feature: gene Location: 4231-4746 bp Feature: gene Location: 4731-5723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4986-5598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4986 -5598 bp Feature: gene Location: 5773-6033 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5791-5938 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5791-5938 bp Feature: gene Location: 6311-6811 bp Feature: domain Description: KOG3196 Location: 6323-6806 bp Feature: domain Description: KOG3196 Location: 6 323-6 806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lysidine_TilS_N (TIGR02432), RVT-GII, group_II_RT_mat (TIGR04416), KOG3196 (KOG3196, NADH:ubiquinone oxidoreductase, NDUFV2/24 kD subunit )

Seq: JAAXCS010000061.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_61, whole genome shotgun sequence (7570 bp)
Overview 1 RT 1: 113-2463 bp Neighborhood of RT #1 [113, 3419] Dimer_Tnp_Tn5 RVT-GII GIIM Tnp_DNA_bind Feature: gene Location: 113-421 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 122-401 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 122-401 bp Feature: gene Location: 605-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809-1469 bp Feature: domain Description: GIIM Note: maturase Location: 1550-1769 bp Feature: domain Description: GIIM Note: maturase Location: 1550-17 69 bp Feature: gene Location: 1899-2048 bp Feature: gene Location: 2271-3419 bp Feature: domain Description: Tnp_DNA_bind Location: 2292-2463 bp Feature: domain Description: Tnp_DNA_bind Location: 2292-2463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dimer_Tnp_Tn5 (pfam02281), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706)

Seq: JAAXCS010000062.1 Wolbachia endosymbiont of Atemnus politus strain K3 wApolv1K3_62, whole genome shotgun sequence (7527 bp)
Overview 1 RT 1: 1-3733 bp Neighborhood of RT #1 [1, 3733] SMC_prok_B tape_meas_TP901 RVT-GII Feature: gene Location: 1-1782 bp Feature: domain Description: SMC_prok_B Location: 145-553 bp Feature: domain Description: SMC_prok_B Location: 145-553 bp Feature: domain Description: tape_meas_TP901 Location: 604-1678 bp Feature: domain Description: tape_meas_TP901 Location: 604-1678 bp Feature: gene Location: 1818-3119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2073-2763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2073-2763 bp Feature: gene Location: 3390-3620 bp Feature: gene Location: 3581-3733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), tape_meas_TP901 (TIGR01760), RVT-GII