myRT

myRT report for GCA_013314655.1_ASM1331465v1

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Seq: JABTYM010000076.1 Escherichia coli strain MCE19 NODE_19_length_89838_cov_27.0663, whole genome shotgun sequence (89838 bp)
Overview 1 RT 1: 6298-12234 bp Neighborhood of RT #1 [6298, 12500] RVT-UG5 nitrilase PRK09692 HTH_XRE Feature: gene Location: 6298-6441 bp Feature: gene Location: 6447-7136 bp Feature: gene Location: 7133-10009 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7607-8135 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7607-81 35 bp Feature: domain Description: nitrilase Location: 9347-9929 bp Feature: domain Description: nitrilase Location: 9347-9929 bp Feature: gene Location: 10102-11358 bp Feature: domain Description: PRK09692 Location: 10111-11314 bp Feature: domain Description: PRK09692 Location: 1 01 1 1 -1 1 31 4 bp Feature: gene Location: 12036-12500 bp Feature: domain Description: HTH_XRE Location: 12066-12234 bp Feature: domain Description: HTH_XRE Location: 1 2066-1 2234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional), HTH_XRE (smart00530)

Seq: JABTYM010000068.1 Escherichia coli strain MCE19 NODE_27_length_51074_cov_26.4502, whole genome shotgun sequence (51074 bp)
Overview 1 RT 1: 9862-13199 bp Neighborhood of RT #1 [9862, 13199] YhhI YhhI YhhI RVT-GII GIIM Feature: gene Location: 9862-10998 bp Feature: domain Description: YhhI Location: 9865-10228 bp Feature: domain Description: YhhI Location: 9865-102 2 8 bp Feature: domain Description: YhhI Location: 10285-10639 bp Feature: domain Description: YhhI Location: 102 85-10639 bp Feature: domain Description: YhhI Location: 10657-10900 bp Feature: domain Description: YhhI Location: 10657-10900 bp Feature: gene Location: 11223-11372 bp Feature: gene Location: 11445-12695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11649-12306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11649-12 306 bp Feature: domain Description: GIIM Note: maturase Location: 12387-12609 bp Feature: domain Description: GIIM Note: maturase Location: 12 387-12 609 bp Feature: gene Location: 12719-13006 bp Feature: gene Location: 13059-13199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: JABTYM010000037.1 Escherichia coli strain MCE19 NODE_58_length_2303_cov_87.3952, whole genome shotgun sequence (2303 bp)
Overview 1 RT 1: 107-2295 bp Neighborhood of RT #1 [107, 2295] RVT-GII GIIM Feature: gene Location: 107-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 80-1112 bp Feature: domain Description: GIIM Note: maturase Location: 1187-1385 bp Feature: domain Description: GIIM Note: maturase Location: 1187-13 85 bp Feature: gene Location: 1924-2295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)