myRT

myRT report for GCA_013314835.1_ASM1331483v1

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Seq: JABUEX010000097.1 Syntrophothermus sp. isolate Ch98 NODE_10280_length_5420_cov_10.1836_ID_8707143, whole genome shotgun sequence (5420 bp)
Overview 1 RT 1: 2845-5419 bp Neighborhood of RT #1 [2845, 5418] IbpA YfdX RVT-GII Feature: gene Location: 2845-3399 bp Feature: domain Description: IbpA Location: 2974-3388 bp Feature: domain Description: IbpA Location: 2974-3388 bp Feature: gene Location: 3478-4443 bp Feature: domain Description: YfdX Location: 3739-4150 bp Feature: domain Description: YfdX Location: 3739-41 50 bp Feature: gene Location: 4924-5418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263-5419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263-541 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IbpA (COG0071), YfdX (pfam10938), RVT-GII

Seq: JABUEX010000020.1 Syntrophothermus sp. isolate Ch98 NODE_1028_length_49963_cov_23.8662_ID_8688639, whole genome shotgun sequence (49963 bp)
Overview 1 RT 1: 34321-37874 bp Neighborhood of RT #1 [34321, 37874] GlpR Tdh RVT-GII GIIM Feature: gene Location: 34321-35106 bp Feature: domain Description: GlpR Location: 34351-35098 bp Feature: domain Description: GlpR Location: 34351-35098 bp Feature: gene Location: 35287-35892 bp Feature: domain Description: Tdh Location: 35338-35884 bp Feature: domain Description: Tdh Location: 35338-35884 bp Feature: gene Location: 36021-37433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36369-36987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36369-36987 bp Feature: domain Description: GIIM Note: maturase Location: 37035-37245 bp Feature: domain Description: GIIM Note: maturase Location: 37035-372 45 bp Feature: gene Location: 37451-37582 bp Feature: gene Location: 37113-37874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlpR (COG1349), Tdh (COG1063), RVT-GII, GIIM (pfam08388)

Seq: JABUEX010000151.1 Syntrophothermus sp. isolate Ch98 NODE_25909_length_2471_cov_47.4642_ID_8738401, whole genome shotgun sequence (2471 bp)
Overview 1 RT 1: 2-2286 bp Neighborhood of RT #1 [2, 2354] RVT-GII GIIM Feature: gene Location: 2-406 bp Feature: gene Location: 599-859 bp Feature: gene Location: 1110-2354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1347-1971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 47-1971 bp Feature: domain Description: GIIM Note: maturase Location: 2067-2286 bp Feature: domain Description: GIIM Note: maturase Location: 2067-2286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABUEX010000009.1 Syntrophothermus sp. isolate Ch98 NODE_704_length_68942_cov_55.1195_ID_8687991, whole genome shotgun sequence (68942 bp)
Overview 1 RT 1: 19419-22475 bp Neighborhood of RT #1 [19419, 22981] RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 19419-19772 bp Feature: gene Location: 19778-19999 bp Feature: gene Location: 20005-21114 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20215-20869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20215-20869 bp Feature: gene Location: 21435-21839 bp Feature: domain Description: Avd_like Location: 21525-21831 bp Feature: domain Description: Avd_like Location: 21525-21831 bp Feature: gene Location: 21848-22981 bp Feature: domain Description: FGE-sulfatase Location: 22106-22475 bp Feature: domain Description: FGE-sulfatase Location: 22106-224 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)