myRT

myRT report for GCA_013314855.1_ASM1331485v1

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Seq: JABUEW010000024.1 Firmicutes bacterium isolate Ch48 NODE_1223_length_43357_cov_36.0286_ID_8689029, whole genome shotgun sequence (43357 bp)
Overview 1 RT 1: 1839-5839 bp Neighborhood of RT #1 [1839, 5847] Phage_holin_6_1 CwlA RVT-DGRs Avd_like pfam03781 YfmG Feature: gene Location: 1839-2237 bp Feature: domain Description: Phage_holin_6_1 Location: 1860-2172 bp Feature: domain Description: Phage_holin_6_1 Location: 1 860-21 72 bp Feature: gene Location: 2239-2868 bp Feature: domain Description: CwlA Location: 2242-2710 bp Feature: domain Description: CwlA Location: 2242-271 0 bp Feature: gene Location: 2868-4067 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3144-3807 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 44-3807 bp Feature: gene Location: 4321-4659 bp Feature: domain Description: Avd_like Location: 4339-4651 bp Feature: domain Description: Avd_like Location: 4339-4651 bp Feature: gene Location: 4738-5847 bp Feature: domain Description: pfam03781 Location: 4981-5317 bp Feature: domain Description: pfam03781 Location: 4981 -531 7 bp Feature: domain Description: YfmG Location: 5695-5839 bp Feature: domain Description: YfmG Location: 5695-5839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_6_1 (pfam09682), CwlA (COG5632), RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), YfmG (COG1262)

Seq: JABUEW010000102.1 Firmicutes bacterium isolate Ch48 NODE_3235_length_15282_cov_30.6565_ID_8693053, whole genome shotgun sequence (15282 bp)
Overview 1 RT 1: 4734-6835 bp Neighborhood of RT #1 [4734, 6835] RVT-GII pepcterm_ATPase Feature: gene Location: 4734-4886 bp Feature: gene Location: 5072-5350 bp Feature: gene Location: 5331-5828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5427-5817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542 7-5817 bp Feature: gene Location: 6044-6520 bp Feature: domain Description: pepcterm_ATPase Location: 6059-6422 bp Feature: domain Description: pepcterm_ATPase Location: 6059-642 2 bp Feature: gene Location: 6698-6835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pepcterm_ATPase (TIGR03015)

Seq: JABUEW010000106.1 Firmicutes bacterium isolate Ch48 NODE_3313_length_14922_cov_11.6441_ID_8693209, whole genome shotgun sequence (14922 bp)
Overview 1 RT 1: 41-9988 bp Neighborhood of RT #1 [41, 9988] AAA_25 sigma70-ECF RVT-GII GIIM xerC XerD xerC RVT-GII Feature: gene Location: 41-1318 bp Feature: domain Description: AAA_25 Location: 206-689 bp Feature: domain Description: AAA_25 Location: 206-689 bp Feature: gene Location: 1413-2249 bp Feature: domain Description: sigma70-ECF Location: 1800-2235 bp Feature: domain Description: sigma70-ECF Location: 1800-223 5 bp Feature: gene Location: 2507-3097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2510-2651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2510-2651 bp Feature: domain Description: GIIM Note: maturase Location: 2708-2936 bp Feature: domain Description: GIIM Note: maturase Location: 2708-293 6 bp Feature: gene Location: 3213-4274 bp Feature: domain Description: xerC Location: 3297-4230 bp Feature: domain Description: xerC Location: 3 297-423 0 bp Feature: gene Location: 4268-5830 bp Feature: domain Description: XerD Location: 4871-5786 bp Feature: domain Description: XerD Location: 4871-5786 bp Feature: gene Location: 5823-6839 bp Feature: domain Description: xerC Location: 5829-6774 bp Feature: domain Description: xerC Location: 5829-6774 bp Feature: gene Location: 6853-7722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7210-7675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7210-7675 bp Feature: gene Location: 8182-8895 bp Feature: gene Location: 9314-9988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), sigma70-ECF (TIGR02937), RVT-GII, GIIM (pfam08388), xerC (PRK01287), XerD (COG4974)