myRT

myRT report for GCA_013316075.1_ASM1331607v1

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Seq: WSNN01000142.1 Parabacteroides sp. isolate RACS_051 NODE_531_length_6735_cov_21.307900, whole genome shotgun sequence (6735 bp)
Overview 1 RT 1: 4603-6735 bp Neighborhood of RT #1 [4603, 6734] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Feature: gene Location: 4603-5619 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4633-4882 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4633-4882 bp Feature: domain Description: Phage_int_SAM_5 Location: 4930-5239 bp Feature: domain Description: Phage_int_SAM_5 Location: 4930-5239 bp Feature: domain Description: INTN1_C_like Location: 5290-5596 bp Feature: domain Description: INTN1 _C_like Location: 5290-5596 bp Feature: gene Location: 6016-6156 bp Feature: gene Location: 6162-6734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6426-6735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6426-6735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII

Seq: WSNN01000198.1 Parabacteroides sp. isolate RACS_051 NODE_969_length_2509_cov_23.871299, whole genome shotgun sequence (2509 bp)
Overview 1 RT 1: 583-2368 bp Neighborhood of RT #1 [583, 2406] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 583-2406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847-1669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847-1669 bp Feature: domain Description: Intron_maturas2 Location: 1843-2086 bp Feature: domain Description: Intron_maturas2 Location: 1843-2 086 bp Feature: domain Description: HNHc Note: nucleases Location: 2197-2368 bp Feature: domain Description: HNHc Note: nucleases Location: 2 197-2 368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)