myRT

myRT report for GCA_013317215.1_ASM1331721v1

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Seq: JAALXV010000051.1 Agrobacterium vitis strain V80/94 V80_94_34, whole genome shotgun sequence (11183 bp)
Overview 1 RT 1: 1756-4849 bp Neighborhood of RT #1 [1756, 4881] Phage_int_SAM_4 INT_RitA_C_like RVT-GII PHA02517 Feature: gene Location: 1756-2733 bp Feature: domain Description: Phage_int_SAM_4 Location: 1846-2074 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 846-2074 bp Feature: domain Description: INT_RitA_C_like Location: 2164-2701 bp Feature: domain Description: INT_RitA_C_like Location: 21 64-2701 bp Feature: gene Location: 2783-2974 bp Feature: gene Location: 3046-3819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3319-3721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 9-3721 bp Feature: gene Location: 3848-4297 bp Feature: gene Location: 4429-4881 bp Feature: domain Description: PHA02517 Location: 4495-4849 bp Feature: domain Description: PHA0251 7 Location: 4495-4849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JAALXV010000050.1 Agrobacterium vitis strain V80/94 V80_94_35, whole genome shotgun sequence (9227 bp)
Overview 1 RT 1: 5773-9131 bp Neighborhood of RT #1 [5773, 9226] COG3547 RVT-GII GIIM INT_RitC_C_like DDE_3 Feature: gene Location: 5773-6795 bp Feature: domain Description: COG3547 Location: 6259-6766 bp Feature: domain Description: COG3547 Location: 62 59-6766 bp Feature: gene Location: 7240-7578 bp Feature: gene Location: 7674-8510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7677-7989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7677-7989 bp Feature: domain Description: GIIM Note: maturase Location: 8061-8289 bp Feature: domain Description: GIIM Note: maturase Location: 8061-82 89 bp Feature: gene Location: 8633-8962 bp Feature: domain Description: INT_RitC_C_like Location: 8651-8882 bp Feature: domain Description: INT_RitC_C_like Location: 8651-8882 bp Feature: gene Location: 8966-9226 bp Feature: domain Description: DDE_3 Location: 8969-9131 bp Feature: domain Description: DDE_3 Location: 8969-9131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), INT_RitC_C_like (cd01182), DDE_3 (pfam13358)